Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20097
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48045-1|CAA88103.2| 630|Caenorhabditis elegans Hypothetical pr... 32 0.11
U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated ... 30 0.61
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 30 0.61
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 30 0.61
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 30 0.61
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 30 0.61
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 30 0.61
AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like ad... 30 0.61
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 30 0.61
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 30 0.61
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 30 0.61
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 30 0.61
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 30 0.61
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z36237-2|CAE17761.1| 178|Caenorhabditis elegans Hypothetical pr... 28 2.4
U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 28 2.4
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 27 3.2
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 27 3.2
Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical pr... 26 7.5
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 26 7.5
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 26 7.5
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 26 7.5
AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear recep... 26 7.5
Z70034-8|CAA93857.1| 586|Caenorhabditis elegans Hypothetical pr... 26 9.9
U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical pr... 26 9.9
U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical pr... 26 9.9
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 26 9.9
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 26 9.9
>Z48045-1|CAA88103.2| 630|Caenorhabditis elegans Hypothetical
protein C41C4.3 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 150 EGRNWFLRHSGFVEVPD*E*SSIPRWLRSKAVNIHDWNSVRADKKKHSDAEEQETISHYL 329
EG LR GF +V + +SIP W+++ + ++ S +D S +E T+ H+L
Sbjct: 292 EGMTRNLRSIGFYDV---KMNSIPNWIKTDQIQFLEFQSSISDNVDMSALDELPTLEHFL 348
>U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated
protein 11, isoform f protein.
Length = 198
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 128 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 164
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 587 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 623
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 516 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 552
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 478 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 514
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 476 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 512
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 464 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 500
>AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 289
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 219 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 255
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 386 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 422
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 465 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 501
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 476 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 512
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 478 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 514
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 29.9 bits (64), Expect = 0.61
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 269 YRIPV-MYIDCFGTQPAWNRALLSVGDLNEAGVPEKP 162
Y P+ MY FG QP WN A+ + G G P P
Sbjct: 516 YTAPMGMYQQPFGAQPMWNPAMAAYGQQYGYGQPVPP 552
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 356 CFQILLIPIQVMTDCFLFFGI*MFLLVGTYRIPVMYID 243
CF + P+ T L FGI +F G Y P + D
Sbjct: 222 CFSAVSYPVTTSTSTILSFGIFLFAFSGHYVFPTIQHD 259
>Z36237-2|CAE17761.1| 178|Caenorhabditis elegans Hypothetical
protein C48D5.3 protein.
Length = 178
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 313 VSCSSASECFFLSARTEFQSCILTALERNQRGIELYSQSGTSTKPE-CLRNQFLPSQLVV 137
+ C + CF A T + C L AL+ N+ G + Q + + C R+QF PS+ +
Sbjct: 64 MDCDTGLSCFH--ATTYSKGCCLMALKPNETGCMIEDQCKQACESTICDRSQF-PSRCLC 120
Query: 136 E 134
E
Sbjct: 121 E 121
>U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical
protein D1014.6 protein.
Length = 477
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 249 IHDWNSVRADKKKHSDAEEQETISHYLNRNKEYLETYIL 365
+ +WN+ R D H D ++ + LNR Y +++ L
Sbjct: 86 VEEWNNNRTDSIPHEDRHKEWANQNLLNRKYLYHDSFSL 124
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 133 LLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVPKQSIY 252
L P IGK E + T +SPTE A+ +A +PK+ +Y
Sbjct: 414 LNPAIGKIE--YEVTKIEGKSPTEYVAKCYAVNIPKELLY 451
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 231 RSKAVNIHDWNSVRADKKKHS-DAEEQETISHYLNRNKEYLE 353
RSK + +H W ++ D+ ++ D E++ +S + + + LE
Sbjct: 102 RSKYIKVHAWQALERDEPEYDYDTEDEAWLSDHTHIDPRVLE 143
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 231 RSKAVNIHDWNSVRADKKKHS-DAEEQETISHYLNRNKEYLE 353
RSK + +H W ++ D+ ++ D E++ +S + + + LE
Sbjct: 102 RSKYIKVHAWQALERDEPEYDYDTEDEAWLSDHTHIDPRVLE 143
>Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical
protein C08F8.8 protein.
Length = 416
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 DKDXSRSSNTPIQSKTSDGRSPQLLPPIGK-AEIGFSGTPASLRSPTESKAR 216
++D + SSN ++ ++D RS L P+ + S P+S SP+ S+ R
Sbjct: 342 EEDDATSSNQFDENSSTDDRSVGELDPVQLFLALNSSTQPSSASSPSSSRPR 393
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 268 TEFQSCILTALERNQRGIELYSQSGTSTKPECLRNQFLPSQ 146
T+F + L R ++ E+YS+S +P +RN L ++
Sbjct: 577 TDFVPEVDRRLSRREQSEEIYSRSQRDEEPRTIRNYHLSNE 617
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 268 TEFQSCILTALERNQRGIELYSQSGTSTKPECLRNQFLPSQ 146
T+F + L R ++ E+YS+S +P +RN L ++
Sbjct: 532 TDFVPEVDRRLSRREQSEEIYSRSQRDEEPRTIRNYHLSNE 572
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 268 TEFQSCILTALERNQRGIELYSQSGTSTKPECLRNQFLPSQ 146
T+F + L R ++ E+YS+S +P +RN L ++
Sbjct: 627 TDFVPEVDRRLSRREQSEEIYSRSQRDEEPRTIRNYHLSNE 667
>AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear receptor
NHR-67 protein.
Length = 409
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 64 DKDXSRSSNTPIQSKTSDGRSPQLLPPIGK-AEIGFSGTPASLRSPTESKAR 216
++D + SSN ++ ++D RS L P+ + S P+S SP+ S+ R
Sbjct: 335 EEDDATSSNQFDENSSTDDRSVGELDPVQLFLALNSSTQPSSASSPSSSRPR 386
>Z70034-8|CAA93857.1| 586|Caenorhabditis elegans Hypothetical
protein C18E9.8 protein.
Length = 586
Score = 25.8 bits (54), Expect = 9.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 178 ECLRNQFLPSQLVVEVEEIVHPM 110
EC R +P +++V++ +HPM
Sbjct: 404 ECARGDLIPGEVLVQLLTYMHPM 426
>U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical
protein T20F7.1 protein.
Length = 773
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 276 DKKKHSDAEEQETI-SHYLNRNKEYL 350
D + E QE + +HY+N N+EYL
Sbjct: 76 DMNQQYGVENQEYVDAHYINTNEEYL 101
>U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical
protein C09B9.7 protein.
Length = 913
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 71 TXPEVVILRSSLRHRMDDLLNFYHQLGRQK 160
T P+V+I S ++ L++ Y Q GR+K
Sbjct: 656 TYPDVIISASEKSKALNTLISSYSQTGRRK 685
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 103 SKTSDGRSPQLLPPIGKAEIGFSGTPASLRSPTESKARF 219
S+T G S P+G E FSG+ ASL S + RF
Sbjct: 772 SETISGDSNSFGRPLGAPE--FSGSSASLYSDDDDSTRF 808
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 103 SKTSDGRSPQLLPPIGKAEIGFSGTPASLRSPTESKARF 219
S+T G S P+G E FSG+ ASL S + RF
Sbjct: 772 SETISGDSNSFGRPLGAPE--FSGSSASLYSDDDDSTRF 808
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,360,508
Number of Sequences: 27780
Number of extensions: 195991
Number of successful extensions: 648
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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