BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20096
(719 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.8
AY745208-1|AAU93475.1| 103|Anopheles gambiae cytochrome P450 pr... 25 2.4
AY330178-1|AAQ16284.1| 176|Anopheles gambiae odorant-binding pr... 25 3.1
AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione transf... 23 7.2
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 23 9.5
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 9.5
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 333 LNHLIHQAVQQTLSGTRVGVCTRPIL 256
L+HL H A QQ G+ G T+P L
Sbjct: 819 LHHLHHHAAQQPPPGSHPGAQTQPQL 844
>AY745208-1|AAU93475.1| 103|Anopheles gambiae cytochrome P450
protein.
Length = 103
Score = 25.0 bits (52), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 192 KTTADCSLGGRDSGKPNFVLMQLHW*H 112
+T ADCSLGG K VL+ L H
Sbjct: 20 RTLADCSLGGYRVPKDTTVLIGLRTVH 46
>AY330178-1|AAQ16284.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP51 protein.
Length = 176
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 310 CLMYQMIENCPEESLRKDDVCSPVSS 387
C+M + + NCP E +C V S
Sbjct: 144 CIMVESMRNCPAERWDSSVLCEKVRS 169
>AY255856-1|AAP13482.1| 248|Anopheles gambiae glutathione
transferase o1 protein.
Length = 248
Score = 23.4 bits (48), Expect = 7.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 39 GYFSYLIWHWCK 74
G Y+IW WC+
Sbjct: 173 GMIDYMIWPWCE 184
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 23.0 bits (47), Expect = 9.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 45 FSYLIWHWCKLSSAHLT*ENLDCVTNGVALIRSWVFRSLCLPENSLL 185
F Y I HW + ++ H+ + CV +FR L ENS++
Sbjct: 438 FEYAIGHWLQKATEHV----IGCVLCSPGCFS--LFRGRALMENSVM 478
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 9.5
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 452 LKFVLNGF*EIISNRSAVRATFSQHEHVARMWLFVYTP 565
+ FVL N S T E+V RMWL P
Sbjct: 1340 ISFVLQEPDNESENSSNTTLTIQGEENVQRMWLATVVP 1377
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,517
Number of Sequences: 2352
Number of extensions: 19588
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -