Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20096
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118371-1|AAM48400.1|  676|Drosophila melanogaster RE13854p pro...    31   1.2  
AE014298-2438|AAF48635.1|  676|Drosophila melanogaster CG4521-PA...    31   1.2  
BT004480-1|AAO42644.1|  787|Drosophila melanogaster LD47550p pro...    31   2.1  
AE013599-943|AAF58888.1|  787|Drosophila melanogaster CG1671-PA ...    31   2.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   8.4  
AE013599-1885|AAM71003.1|  238|Drosophila melanogaster CG30073-P...    29   8.4  

>AY118371-1|AAM48400.1|  676|Drosophila melanogaster RE13854p
           protein.
          Length = 676

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +2

Query: 65  LVQAEFGTPYLRKSRLCHQWSCINTKLGFPESLPPREQSAV----VLSRILPDGAWRNLT 232
           LVQ E     LR S+ C +W   NT+L   + L P  Q+AV     LS  LP+G+++  T
Sbjct: 183 LVQQEPPKASLRLSKCCGKWGSYNTQLQNCD-LQPNHQAAVDGLLRLSPQLPEGSYQ--T 239

Query: 233 DHILDVCSRIG 265
            + L  C + G
Sbjct: 240 SYGLPDCGQPG 250


>AE014298-2438|AAF48635.1|  676|Drosophila melanogaster CG4521-PA
           protein.
          Length = 676

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +2

Query: 65  LVQAEFGTPYLRKSRLCHQWSCINTKLGFPESLPPREQSAV----VLSRILPDGAWRNLT 232
           LVQ E     LR S+ C +W   NT+L   + L P  Q+AV     LS  LP+G+++  T
Sbjct: 183 LVQQEPPKASLRLSKCCGKWGSYNTQLQNCD-LQPNHQAAVDGLLRLSPQLPEGSYQ--T 239

Query: 233 DHILDVCSRIG 265
            + L  C + G
Sbjct: 240 SYGLPDCGQPG 250


>BT004480-1|AAO42644.1|  787|Drosophila melanogaster LD47550p
           protein.
          Length = 787

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 252 HTSRIWSVRFRQAPSGNILLKTTADCSL 169
           HT  +WSVRF  +P   I+L +++DC+L
Sbjct: 519 HTRGVWSVRF--SPVDQIVLTSSSDCTL 544


>AE013599-943|AAF58888.1|  787|Drosophila melanogaster CG1671-PA
           protein.
          Length = 787

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 252 HTSRIWSVRFRQAPSGNILLKTTADCSL 169
           HT  +WSVRF  +P   I+L +++DC+L
Sbjct: 519 HTRGVWSVRF--SPVDQIVLTSSSDCTL 544


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +1

Query: 235  PYPGCVLENRPRTYTNTCPGQGLLHCLMYQMIENCPEESLRKDDVC 372
            P+ GC  ++ P  Y + CP   + + + +   + C EES   + +C
Sbjct: 1824 PFNGC--QSVPCVYNHDCPPSQMCNRMTHTCFDVCDEESCGDNAIC 1867


>AE013599-1885|AAM71003.1|  238|Drosophila melanogaster CG30073-PA
           protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 277 TNTCPGQGLLH--CLMYQMIENCPEESLRKDDVCSPVSSL 390
           ++TC    +LH  C M  +  NCP E+   D  C+ +  L
Sbjct: 145 SSTCLPYAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKL 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,709,663
Number of Sequences: 53049
Number of extensions: 852721
Number of successful extensions: 3082
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3082
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)