Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20095
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 389 QNTI*QFVSVNGSLSEHIYFKQLET 463
           +N I Q+V+VNG +  H+    + T
Sbjct: 459 RNQIGQYVTVNGDVVSHLNITAIHT 483


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 193 NSDSNKSGFVSTKRTSTNYLNRSLEK 116
           + DS+ +G   T++T T Y    LEK
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEK 200


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 193 NSDSNKSGFVSTKRTSTNYLNRSLEK 116
           + DS+ +G   T++T T Y    LEK
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEK 200


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 193 NSDSNKSGFVSTKRTSTNYLNRSLEK 116
           + DS+ +G   T++T T Y    LEK
Sbjct: 175 HGDSSATGNKRTRQTYTRYQTLELEK 200


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 577 LKYEIIIFVNFKCNIIMKLGY 515
           L Y I+  + F C  +MKL Y
Sbjct: 357 LSYLILFSIGFNCFWVMKLLY 377


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 127 NDSSNLWMSF*CSQIHFYLSLNFKG 201
           ND   LW+ + CS     + + F G
Sbjct: 246 NDGLQLWVDYGCSPKKLIVGIPFYG 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,722
Number of Sequences: 336
Number of extensions: 2947
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)