Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20094
(527 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 135 5e-31
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 65 1e-09
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 64 2e-09
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 64 2e-09
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 58 1e-07
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 57 3e-07
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 56 7e-07
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 56 7e-07
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 50 3e-05
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 48 1e-04
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 44 0.002
UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus i... 44 0.003
UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 40 0.027
UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to endonuclea... 39 0.062
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 39 0.082
UniRef50_UPI00006CD1CA Cluster: hypothetical protein TTHERM_0012... 38 0.11
UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella v... 38 0.11
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 38 0.19
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 37 0.25
UniRef50_UPI0000D578A4 Cluster: PREDICTED: similar to RNA-direct... 36 0.44
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 36 0.58
UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to endonuclea... 36 0.58
UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila melanogaster|... 36 0.58
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 36 0.76
UniRef50_A7SR43 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.0
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 35 1.0
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 35 1.0
UniRef50_A3QVU5 Cluster: Transthyretin; n=2; Petromyzontidae|Rep... 35 1.3
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6... 34 1.8
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 34 1.8
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 34 2.3
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 33 3.1
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 33 4.1
UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse tr... 33 4.1
UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to endonuclea... 33 4.1
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 33 4.1
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 33 4.1
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 4.1
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 33 4.1
UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to ENSANGP000... 33 5.4
UniRef50_Q5YQM2 Cluster: Putative serine/threonine protein kinas... 32 7.1
UniRef50_A3W1W1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encod... 32 9.4
UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 1... 32 9.4
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 135 bits (327), Expect = 5e-31
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
PWARKVKYLGVTLDASMTFRPHIK+VRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI
Sbjct: 759 PWARKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 818
Query: 435 RPV 443
RPV
Sbjct: 819 RPV 821
Score = 83.4 bits (197), Expect = 3e-15
Identities = 62/148 (41%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 100 LALGQWFRKWPIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPGPGR--- 270
L LGQWFRKW IDINPAKSTAVLFQ N+TPPITLF PIP +
Sbjct: 707 LTLGQWFRKWRIDINPAKSTAVLFQRGNSPLISSRIRRRNITPPITLFGLPIPWARKVKY 766
Query: 271 -SSTWALPWMHR*HSARI*NQSVTV-PRLFSVDSTP*SVSGVKCPFGTR*HFTKLA*GPF 444
T R H + +++ + RL+ P K + K P
Sbjct: 767 LGVTLDASMTFRPHIKTVRDRAAFILGRLY-----PMICKRSKMSLRNKVTLYKTCIRPV 821
Query: 445 MTYASVVFAHAGPHTHRHP-PILQSRFC 525
MTYASVVFAHA TH LQSRFC
Sbjct: 822 MTYASVVFAHAA-RTHIDTLQSLQSRFC 848
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +2
Query: 2 SPPTHLALFADDTTVYYSSRNKSLIAKKLQSA 97
SPPT LALFADDTTVYYSSRNKSLIA KLQSA
Sbjct: 674 SPPTQLALFADDTTVYYSSRNKSLIASKLQSA 705
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
PW+ +VKYLGV LD ++F PH+ + G L ++C+RS +S+ NK+ LYK+ I
Sbjct: 1212 PWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVI 1271
Query: 435 RP 440
RP
Sbjct: 1272 RP 1273
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
PW+ VKYLGV LD ++F PH+ + G L ++C+RS +S+ NK+ LYK+ I
Sbjct: 303 PWSDHVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVI 362
Query: 435 RP 440
RP
Sbjct: 363 RP 364
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +3
Query: 258 WARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 437
W + KYLG+ +D +T +PH++ V +RA L +LYP+I + ++ +RNK+ +YK IR
Sbjct: 749 WETEAKYLGMVIDNRVTLKPHVEYVTNRAHTALRQLYPLISRNLQLDVRNKLLIYKLAIR 808
Query: 438 PV 443
P+
Sbjct: 809 PI 810
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 258 WARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 437
W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 766 WVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFN 825
Query: 438 PV 443
P+
Sbjct: 826 PI 827
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 56.8 bits (131), Expect = 3e-07
Identities = 20/62 (32%), Positives = 42/62 (67%)
Frame = +3
Query: 258 WARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 437
W +++KY+G+TLD S+T++ H+ + ++ L L ++C+++ ++L NK LY + +R
Sbjct: 336 WIKQIKYMGLTLDTSLTYKTHLINAANKTKSALKSLNSLLCRKTHLNLANKRLLYLSTLR 395
Query: 438 PV 443
P+
Sbjct: 396 PI 397
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 5 PPTHLALFADDTTVYYSSRNKSLIAKKLQ 91
P T LAL+ADDT + +SR+ LI ++LQ
Sbjct: 265 PKTDLALYADDTAIIATSRSPQLITQRLQ 293
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 55.6 bits (128), Expect = 7e-07
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = +3
Query: 351 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
+LGRL+P++C +SKMSLR+K+ LYKTCIRPV
Sbjct: 2 VLGRLHPLLCHKSKMSLRHKLILYKTCIRPV 32
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 55.6 bits (128), Expect = 7e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P KYLGV LD +TF H+ +R R + + Y ++ RSK+SL NK+T+YK +
Sbjct: 740 PQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQIL 799
Query: 435 RP 440
P
Sbjct: 800 AP 801
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
+ KYLG+TLD +TF PH+K+ R + +L ++ ++S M+LR K +Y C+ P+
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPI 808
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 273 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 806
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY + +
Sbjct: 731 PQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVL 790
Query: 435 RPV 443
+P+
Sbjct: 791 KPI 793
>UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus
immersus|Rep: Reverse transcriptase - Ascobolus immersus
Length = 746
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVHD 449
V++LG+ LD ++FRPH+++ A L L + ++L N LY+ CI PV D
Sbjct: 390 VRWLGILLDRKLSFRPHVENRIAAAGRALSSLLRLSTTEKGLTLSNMRQLYQACILPVID 449
>UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1
retrotransposable element R1DM; n=13; Drosophila|Rep:
Putative 115 kDa protein in type-1 retrotransposable
element R1DM - Drosophila melanogaster (Fruit fly)
Length = 1021
Score = 40.3 bits (90), Expect = 0.027
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P+ R +YLG+T+ M F HI S+R R ++G L ++ S R + T+Y +
Sbjct: 729 PYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLM 788
Query: 435 RP 440
P
Sbjct: 789 AP 790
>UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 467
Score = 39.1 bits (87), Expect = 0.062
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKV--TLYKT 428
P + KYLGVT+ + + H++++R +A+ +G I +R+ S KV T YKT
Sbjct: 263 PQKKTYKYLGVTVRDDLRWNTHVEALRSKASRTMG-----ILRRNLGSCSKKVRETAYKT 317
Query: 429 CIRPVHDLREC 461
+RP + C
Sbjct: 318 LVRPQLEYSSC 328
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 38.7 bits (86), Expect = 0.082
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+ + K+ + P+
Sbjct: 808 KQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPI 866
>UniRef50_UPI00006CD1CA Cluster: hypothetical protein
TTHERM_00129610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00129610 - Tetrahymena
thermophila SB210
Length = 835
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P + KYLG+ +D + T PH+K + R ++ LY + ++ +N+ ++ T +
Sbjct: 617 PIVNQYKYLGINIDGNGTIAPHLKFIEQRWKYLQKALYFI----RDLTFKNQALMWSTFV 672
Query: 435 RPVHDLRECGVRSR 476
+P C + ++
Sbjct: 673 KPYFQYSLCIINTQ 686
>UniRef50_A7SMU7 Cluster: Predicted protein; n=10; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 205
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVH 446
KVK LG+ LD S+T+ H+K + ++ + LG L K+ +SL+ + Y + I+P+
Sbjct: 80 KVKLLGIRLDNSLTWDNHLKYIHNKNSKRLGLLKR---KKKFLSLKARTLFYHSLIQPIL 136
Query: 447 D 449
D
Sbjct: 137 D 137
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 249 THPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 428
T W+ KYLGVTLD +++ H K +A +L P +S +S + K+ +
Sbjct: 1066 TLKWSNSAKYLGVTLDRKLSWVKHTKLTLSKALGAFIQLRPFFNNKS-VSYKTKLRAFSA 1124
Query: 429 CIRPV 443
IR +
Sbjct: 1125 IIRSI 1129
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 37.5 bits (83), Expect = 0.19
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
V+YLGV LD S+ ++ H+K V ++A+ +L L + SL + +Y + + P+
Sbjct: 52 VRYLGVQLDRSLRWKQHLKHVEEKASSVLAALGAIAASTWGSSLISLRQVYLSIVLPI 109
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 37.1 bits (82), Expect = 0.25
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 377
PW+ +VKYLGV LD ++F PH+ + G L ++
Sbjct: 760 PWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSIV 800
>UniRef50_UPI0000D578A4 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 678
Score = 36.3 bits (80), Expect = 0.44
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 106 LGQWFRKWPIDINPAKSTAVLFQ 174
+ W RKW + INP KSTA+LF+
Sbjct: 433 ISTWTRKWRVKINPTKSTAILFK 455
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase
- Strongylocentrotus purpuratus
Length = 1197
Score = 35.9 bits (79), Expect = 0.58
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMS--LRNKVTLYKTCIRPV 443
+K LGV + A++ + HI V RA GR MIC+ K S + + V +Y T IRP+
Sbjct: 967 LKLLGVLIQANLKWDSHISDVVSRA----GRRIFMICRLRKASVPMHDLVNIYSTYIRPL 1022
>UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 561
Score = 35.9 bits (79), Expect = 0.58
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = +3
Query: 273 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
K LGVT D S+ F H+ + +A ILG L + SL V LYKT +RP
Sbjct: 383 KDLGVTFDPSLKFSLHVGKITAKANSILGLLKRNFHHLDEKSL---VLLYKTLVRP 435
>UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila
melanogaster|Rep: HDC03386 - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 35.9 bits (79), Expect = 0.58
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 276 YLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSK 392
YLG+TLD +T+ PHI R +A L +L+ +I K+SK
Sbjct: 36 YLGLTLDRRLTWGPHINRKRIQANIRLKQLHWLIGKKSK 74
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster
subgroup|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1103
Score = 35.5 bits (78), Expect = 0.76
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
>UniRef50_A7SR43 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 193
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
+K LGVTLD+S+T++ HI +V + + ++ + + + ++ V LYKT + P
Sbjct: 52 LKILGVTLDSSLTYKEHITTVLKK---VYAKVAALRRIKRVVPIQTMVALYKTYVLP 105
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 35.1 bits (77), Expect = 1.0
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS-KMSLRNKVTLYKTCIRPVH 446
VK LGV LD +TF HI SV ++A LG L + C S M L+ TL+ + +R +
Sbjct: 51 VKDLGVLLDRGLTFSHHIDSVVNQARKTLGLLKKIACDFSDPMCLK---TLFCSLVRSI- 106
Query: 447 DLRECGV 467
L C V
Sbjct: 107 -LEYCSV 112
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R1) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 35.1 bits (77), Expect = 1.0
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 138 HQPSEKYCGAISEGKLHTDFLPD*EEESHTPDYSL*-TTHPWARKVKYLGVTLDASMTFR 314
H+ ++ C +S GK + + P L T+ + +VK+LG+ + M FR
Sbjct: 665 HEWGKRVCVPVSAGKTTCILMKGHLSANRPPCIRLNGTSISYKSEVKHLGIFVAERMNFR 724
Query: 315 PHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 425
PH +R + ++G L ++ K + R LYK
Sbjct: 725 PHFVYLRGKILGLVGCLRRVMRKSWGLGRRATCILYK 761
>UniRef50_A3QVU5 Cluster: Transthyretin; n=2; Petromyzontidae|Rep:
Transthyretin - Lampetra appendix (American brook
lamprey)
Length = 156
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 391 KCPFGTR*HFTKLA*GPFMTYASVVF-AHAGPHTHRHPPILQSRF 522
K F T+ ++TK PF A VVF AH H H H P+L S F
Sbjct: 98 KVRFDTQAYWTKAGITPFHEAAEVVFMAHGAGHKHYHIPMLLSPF 142
>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
Bilateria|Rep: Endonuclease/reverse transcriptase -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 1045
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKM-SLRNKVTLYKTCIRP 440
+VKYLG+TL + + PH+ ++ ++A R + I + K+ S+ + YK +RP
Sbjct: 847 QVKYLGITLTRDLKWSPHVTNITNKA----NRSFGFIRRNIKVNSIAIREVAYKALVRP 901
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 34.3 bits (75), Expect = 1.8
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 356
P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 801 PFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 33.9 bits (74), Expect = 2.3
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVHD 449
VK+LG+T D + F+ H K+V+++A+ L L + + LYK+ +R V D
Sbjct: 757 VKFLGITFDYRLNFKEHTKNVKNKASRSLNILKFLKGTWWGSDPGTLIQLYKSLVRSVLD 816
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 33.5 bits (73), Expect = 3.1
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 246 TTHPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKV--TL 419
T P + +K LGVT+D +TF H+ +V RA + +L R+ L +V +
Sbjct: 1215 TVIPMSEDIKILGVTVDNKLTFNAHVSNVCRRAIEVYKQL--ARAARASWGLHPEVIKLI 1272
Query: 420 YKTCIRPV 443
Y I P+
Sbjct: 1273 YTATIEPI 1280
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 33.1 bits (72), Expect = 4.1
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRA 344
++VKYLGVTLDA + + HIK ++A
Sbjct: 127 KEVKYLGVTLDAKLNWGKHIKDKCEKA 153
>UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Nasonia vitripennis
Length = 745
Score = 33.1 bits (72), Expect = 4.1
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRA 344
P++ VK LGV +D+ ++++PH++ + RA
Sbjct: 389 PFSNTVKNLGVVMDSKLSWKPHVECITKRA 418
>UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1060
Score = 33.1 bits (72), Expect = 4.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 365
P ++ KYLGVT+ A + + H +++R +A+ LG L
Sbjct: 848 PRVKEYKYLGVTVAADLRWNKHCQTIRHKASRTLGLL 884
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSV---RDRAAFILGRLYP 371
+KYLGV LD + F PH++ V +R L RL P
Sbjct: 656 IKYLGVRLDKELRFAPHVEEVAAKAERTMAALSRLMP 692
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 33.1 bits (72), Expect = 4.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRA---AFILGRLYPMI 377
+ V+YLGV ++ MTF H+ V +A A +LGRL P +
Sbjct: 642 QNVRYLGVDINQRMTFTSHVMRVAAKAEKMAAMLGRLMPNV 682
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 389
+R +KYLG+ +D + + HIK V +RA L M+ RS
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRS 753
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 33.1 bits (72), Expect = 4.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDR 341
P + K+LG+TLD+ F PHIK ++ +
Sbjct: 730 PVVKTTKFLGLTLDSKFNFLPHIKELKKK 758
>UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to
ENSANGP00000012343; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012343 - Nasonia
vitripennis
Length = 804
Score = 32.7 bits (71), Expect = 5.4
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRA 344
++VKYLGVTLDA + + HIK ++A
Sbjct: 189 KEVKYLGVTLDARLNWGKHIKDKCEKA 215
>UniRef50_Q5YQM2 Cluster: Putative serine/threonine protein kinase;
n=1; Nocardia farcinica|Rep: Putative serine/threonine
protein kinase - Nocardia farcinica
Length = 571
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 191 GFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYP 292
G PG G ++HP S +P++ G VPGR P
Sbjct: 447 GGDPGPGPSVAHPGYSSAPHPTVPAPGPVPGRSP 480
>UniRef50_A3W1W1 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. 217|Rep: Putative uncharacterized
protein - Roseovarius sp. 217
Length = 527
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 303 MTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTL 419
M FR + SVR RAA++ G +P + + +++L V L
Sbjct: 238 MVFRRSLTSVRSRAAYLTGLAHPSVIPKDQINLMRMVQL 276
>UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to ORF2-encoded protein - Nasonia vitripennis
Length = 1013
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 168 ISEGKLHTDFLPD*EEES---HTPDYSL*TTHPWARKVKYLGVTLDASMTFRPHIKSVRD 338
+++ K +P+ EEE+ +T Y + + P +KYLG+ + A +TF+ +++ V +
Sbjct: 936 VAKQKEEVTDIPNEEEENGENNTDGYKI-DSQP---TIKYLGIAMVARLTFKQYLERVSN 991
Query: 339 RAA---FILGRLYPMI 377
+AA +L RL P +
Sbjct: 992 KAAKVDSVLSRLIPNV 1007
>UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 115
kDa protein in type-1 retrotransposable element R1DM
(Putative 115 kDa protein in type I retrotransposable
element R1DM) (ORF 2); n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Putative 115 kDa protein in type-1
retrotransposable element R1DM (Putative 115 kDa protein
in type I retrotransposable element R1DM) (ORF 2) -
Nasonia vitripennis
Length = 680
Score = 31.9 bits (69), Expect = 9.4
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLY 422
VKYLGV + M+F+ H+ +R+R ++ RL + ++ + V +Y
Sbjct: 370 VKYLGVNVSMGMSFQVHVDGLRERVVKLI-RLMKRVMRKDWGMRKKAVKVY 419
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,148,968
Number of Sequences: 1657284
Number of extensions: 11318964
Number of successful extensions: 25581
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 24766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25567
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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