Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20094
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.9  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 136 LWAIFGTTVLGLGCALKLLRD 74
           ++ IFG  V+GL C LK   D
Sbjct: 72  VYNIFGAFVMGLFCILKFALD 92


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 501 RVSMCVRARVSEHHTRVSHERALCKF 424
           R S+C  AR +++ TRV H   + ++
Sbjct: 367 RWSLCNSARSNKYPTRVPHRPYVAQY 392


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 155 LFAGLMSMGHFRNHCP 108
           L AGL S G  R+H P
Sbjct: 237 LLAGLQSSGSSRSHQP 252


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -3

Query: 447 HERALCKFCKVSPCSEG 397
           H  +   FC  SPC  G
Sbjct: 334 HCESKVNFCATSPCQNG 350


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 227 PRLLSLDNPSLGQEGQVPGRYP 292
           P + +  NP LGQ   VPG  P
Sbjct: 244 PSIHNSINPFLGQGFAVPGLSP 265


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 423 CKVSPCSEG 397
           CKV+PC  G
Sbjct: 72  CKVNPCENG 80



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 494 LCVCGPA*ANTTLA*VMNGPYASFVKCH 411
           +C C P    TTL+   N   AS   CH
Sbjct: 167 MCRCPPDWEGTTLSQSPNRRRASSNPCH 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,085
Number of Sequences: 336
Number of extensions: 2617
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)