Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20094
(527 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 36 8e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 35 0.002
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 35 0.002
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 34 0.003
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 33 0.004
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 33 0.006
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.024
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 29 0.13
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 29 0.13
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 28 0.17
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.17
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.51
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 0.68
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 0.90
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 1.6
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 3.6
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 3.6
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 3.6
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 4.8
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 23 4.8
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 4.8
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 23 4.8
AF203334-1|AAF19829.1| 110|Anopheles gambiae immune-responsive ... 23 6.3
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 35.9 bits (79), Expect = 8e-04
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFI 353
+R ++YLGVTL +++ PH+K V +RA I
Sbjct: 727 SRSIRYLGVTLQDKLSWLPHVKEVTERAGKI 757
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 34.7 bits (76), Expect = 0.002
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3
Query: 246 TTHPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 356
T P++R +KYLGV L ++++ PH+K+V +A I+
Sbjct: 737 TEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 34.7 bits (76), Expect = 0.002
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 246 TTHPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI---LGRLYP 371
T P++R +K+LGV + +++ PH+ +V RA I +GRL P
Sbjct: 742 TAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMP 786
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 34.3 bits (75), Expect = 0.003
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 356
P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 801 PFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.5 bits (73), Expect = 0.004
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 365
R ++YLGV L +++RPH++ V D+A ++ L
Sbjct: 738 RSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.006
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 389
+R +KYLG+ +D + + HIK V +RA L M+ RS
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRS 753
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.1 bits (67), Expect = 0.024
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRA 344
+R ++YLGVTL +++ PH++ V RA
Sbjct: 794 SRTMRYLGVTLHDHLSWLPHVREVTTRA 821
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 28.7 bits (61), Expect = 0.13
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 273 KYLGVTLDASMTFRPHIKSVRDRAAFILG 359
K LGV LD+S+ F+ HI V R +LG
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG 873
Score = 23.0 bits (47), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 5 PPTHLALFADDTTVYYSSRN 64
PP ++LFADD ++ N
Sbjct: 766 PPDSISLFADDAKIFAPINN 785
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 28.7 bits (61), Expect = 0.13
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 356
+R ++YLGV L + +R H+ V ++A+ ++
Sbjct: 787 SRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
Score = 23.0 bits (47), Expect = 6.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 76 REEASERXLALGQWFRKWPIDINPAKSTAVL 168
R A E + +W ++ +++ PAK+ AVL
Sbjct: 735 RARAEEAVDQVQRWMQQHGLELAPAKTEAVL 765
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 28.3 bits (60), Expect = 0.17
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
+R +KYLG+ LD + + HI+ +RA + L M+ ++ S + + T +
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAK 765
Query: 441 V 443
V
Sbjct: 766 V 766
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.17
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIK 326
R +KYLGV +D ++FR H++
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVE 723
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.51
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIK 326
R +KYLGV +D + F+ H++
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLE 784
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 26.2 bits (55), Expect = 0.68
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRA 344
R ++YLGV +D ++++ H++ +A
Sbjct: 749 RSIRYLGVVIDNQLSWKSHVEYCTTKA 775
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.8 bits (54), Expect = 0.90
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +3
Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILG 359
+ ++YLGV + ++++PH++ +A ++G
Sbjct: 735 QSIRYLGVQIHDHLSWKPHVELSTAKALRVVG 766
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = +2
Query: 140 STQRKVLRCYFRGEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIP 313
S + + Y + + + PG+ + +L L N L E P +PG + P
Sbjct: 279 SEAKHIKEIYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFPGVVQAHP 336
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 3.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 368
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 3.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 368
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 3.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 270 VKYLGVTLDASMTFRPHIKSVRDRA 344
++YLGV + +RPH+ ++A
Sbjct: 734 IRYLGVMIHDHFLWRPHVTMAVEKA 758
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 296 IQGNAQVLDLPGPG 255
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.4 bits (48), Expect = 4.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 439 PFMTYASVVFAHAGPHTHRHPPILQS 516
P YA+ + HA P H PI S
Sbjct: 191 PIAHYAAPIAHHAAPIAHHAAPIAHS 216
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.4 bits (48), Expect = 4.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 439 PFMTYASVVFAHAGPHTHRHPPILQS 516
P YA+ + HA P H PI S
Sbjct: 193 PIAHYAAPIAHHAAPIAHHAAPIAHS 218
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.4 bits (48), Expect = 4.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 439 PFMTYASVVFAHAGPHTHRHPPILQS 516
P YA+ + HA P H PI S
Sbjct: 191 PIAHYAAPIAHHAAPIAHHAAPIAHS 216
>AF203334-1|AAF19829.1| 110|Anopheles gambiae immune-responsive
serine protease-relatedprotein ISPR5 protein.
Length = 110
Score = 23.0 bits (47), Expect = 6.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +3
Query: 345 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVHDLRECG 464
A I + P+ ++ + +TL + C+ P D+ CG
Sbjct: 12 AIIADTVNPLYYIDCRLKYYSNLTLTEACVLPDTDISYCG 51
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,496
Number of Sequences: 2352
Number of extensions: 12430
Number of successful extensions: 41
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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