Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20094
(527 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 58 7e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 7e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 56 4e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 50 2e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 48 6e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 48 6e-06
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 46 3e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 44 1e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 1e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.002
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.005
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 38 0.006
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 38 0.006
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 38 0.006
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 38 0.006
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 38 0.006
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 36 0.026
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 36 0.026
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 36 0.045
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 36 0.045
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 36 0.045
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 36 0.045
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 3.9
AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p pro... 29 5.2
AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler lo... 29 5.2
AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B ... 29 5.2
AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA... 29 5.2
AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of th... 29 5.2
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 25 7.5
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 25 7.7
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 25 7.7
AY113492-1|AAM29497.1| 329|Drosophila melanogaster RE50040p pro... 28 9.0
AE014297-3483|AAF56250.1| 329|Drosophila melanogaster CG5510-PA... 28 9.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.0 bits (134), Expect = 7e-09
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 258 WARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 437
W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 766 WVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFN 825
Query: 438 PV 443
P+
Sbjct: 826 PI 827
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 115 WFRKWPIDINPAKSTAVLF 171
+++KW I INP K+ A+ F
Sbjct: 725 YYKKWKIKINPNKTNAIFF 743
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.0 bits (134), Expect = 7e-09
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 258 WARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIR 437
W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 714 WVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFN 773
Query: 438 PV 443
P+
Sbjct: 774 PI 775
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 115 WFRKWPIDINPAKSTAVLF 171
+++KW I INP K+ A+ F
Sbjct: 673 YYKKWKIKINPNKTNAIFF 691
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P KYLGV LD +TF H+ +R R + + Y ++ RSK+SL NK+T+YK +
Sbjct: 740 PQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQIL 799
Query: 435 RP 440
P
Sbjct: 800 AP 801
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
+ KYLG+TLD +TF PH+K+ R + +L ++ ++S M+LR K +Y C+ P+
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPI 808
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 273 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 806
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 273 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 440
KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 608
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P A +V YLGV LD +T+R HI++ + + L+ +I S +SL +KV LY + +
Sbjct: 733 PKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSIL 792
Query: 435 RPV 443
+P+
Sbjct: 793 KPI 795
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY + +
Sbjct: 731 PQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVL 790
Query: 435 RPV 443
+P+
Sbjct: 791 KPI 793
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY + +
Sbjct: 731 PQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVL 790
Query: 435 RPV 443
+P+
Sbjct: 791 KPI 793
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 255 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 434
P+ R +YLG+T+ M F HI S+R R ++G L ++ S R + T+Y +
Sbjct: 729 PYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLM 788
Query: 435 RP 440
P
Sbjct: 789 AP 790
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+ + K+ + P+
Sbjct: 808 KQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPI 866
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 680 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 738
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 758 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 816
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPI 854
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K+ + P+
Sbjct: 11 KQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPI 69
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPI 854
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 360 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 418
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 267 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPV 443
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPI 865
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 261 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 377
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p protein.
Length = 1928
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 176 GEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIPPAY 322
G P PPGL GG+S L P G+ +P YP + IPPAY
Sbjct: 1284 GPPPGSLPPGL-GGLSALGAAGLGGPGPGK--GMPHFYP--FNFIPPAY 1327
>AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler long
isoform protein.
Length = 2302
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 176 GEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIPPAY 322
G P PPGL GG+S L P G+ +P YP + IPPAY
Sbjct: 1658 GPPPGSLPPGL-GGLSALGAAGLGGPGPGK--GMPHFYP--FNFIPPAY 1701
>AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B
protein.
Length = 2302
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 176 GEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIPPAY 322
G P PPGL GG+S L P G+ +P YP + IPPAY
Sbjct: 1658 GPPPGSLPPGL-GGLSALGAAGLGGPGPGK--GMPHFYP--FNFIPPAY 1701
>AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA,
isoform A protein.
Length = 2280
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 176 GEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIPPAY 322
G P PPGL GG+S L P G+ +P YP + IPPAY
Sbjct: 1636 GPPPGSLPPGL-GGLSALGAAGLGGPGPGK--GMPHFYP--FNFIPPAY 1679
>AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of thick
veins protein.
Length = 2310
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 176 GEAPHGFPPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCIDDIPPAY 322
G P PPGL GG+S L P G+ +P YP + IPPAY
Sbjct: 1666 GPPPGSLPPGL-GGLSALGAAGLGGPGPGK--GMPHFYP--FNFIPPAY 1709
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 25.0 bits (52), Expect(2) = 7.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 104 P*DSGSENGP*TSTQRKVLRCYFRGEAPHGFPPGLGG 214
P SG GP + YF G P G PPG G
Sbjct: 144 PPPSGFSGGPYGPAKPMPPPSYFSGRPPMGGPPGSYG 180
Score = 21.4 bits (43), Expect(2) = 7.5
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 197 PPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCI--DDIPP 316
P G GG + HP ++D S G P PG + D PP
Sbjct: 220 PSGPGGYLEHPPPSAIDGSSDGITYTKPP--PGALIYDSKPP 259
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 25.0 bits (52), Expect(2) = 7.7
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 104 P*DSGSENGP*TSTQRKVLRCYFRGEAPHGFPPGLGG 214
P SG GP + YF G P G PPG G
Sbjct: 144 PPPSGFSGGPYGPAKPMPPPSYFSGRPPMGGPPGSYG 180
Score = 21.4 bits (43), Expect(2) = 7.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 197 PPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCI--DDIPP 316
P G GG + HP ++D S G P PG + D PP
Sbjct: 220 PSGPGGYLEHPPPSAIDGSSDGITYTKPP--PGALIYDSKPP 259
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 25.0 bits (52), Expect(2) = 7.7
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 104 P*DSGSENGP*TSTQRKVLRCYFRGEAPHGFPPGLGG 214
P SG GP + YF G P G PPG G
Sbjct: 144 PPPSGFSGGPYGPAKPMPPPSYFSGRPPMGGPPGSYG 180
Score = 21.4 bits (43), Expect(2) = 7.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 197 PPGLGGGISHPRLLSLDNPSLGQEGQVPGRYPGCI--DDIPP 316
P G GG + HP ++D S G P PG + D PP
Sbjct: 220 PSGPGGYLEHPPPSAIDGSSDGITYTKPP--PGALIYDSKPP 259
>AY113492-1|AAM29497.1| 329|Drosophila melanogaster RE50040p
protein.
Length = 329
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 400 FGTR*HFTKLA*GPFMTYASVVFAHAGPHTHRHP 501
FG++ HF+ LA TY++ H GPH H+HP
Sbjct: 127 FGSKDHFSGLAI-ILDTYSN----HNGPHNHQHP 155
>AE014297-3483|AAF56250.1| 329|Drosophila melanogaster CG5510-PA
protein.
Length = 329
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 400 FGTR*HFTKLA*GPFMTYASVVFAHAGPHTHRHP 501
FG++ HF+ LA TY++ H GPH H+HP
Sbjct: 127 FGSKDHFSGLAI-ILDTYSN----HNGPHNHQHP 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,293,492
Number of Sequences: 53049
Number of extensions: 543332
Number of successful extensions: 1580
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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