Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20094
         (527 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family...    28   3.4  
At4g02180.1 68417.m00290 DC1 domain-containing protein contains ...    28   3.4  
At4g24260.1 68417.m03481 endo-1,4-beta-glucanase, putative / cel...    28   4.5  
At2g19660.1 68415.m02297 DC1 domain-containing protein contains ...    27   5.9  
At4g19160.3 68417.m02827 expressed protein                             27   7.8  
At4g19160.2 68417.m02826 expressed protein                             27   7.8  
At4g19160.1 68417.m02828 expressed protein                             27   7.8  

>At4g36350.1 68417.m05161 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 466

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 425 NLHKARS*LTRVWCSLTRARTHIDTLQSYN 514
           N +KA   ++ +W S+ RA  HI  L SY+
Sbjct: 253 NAYKASKSISPLWYSIRRASAHIIVLSSYS 282


>At4g02180.1 68417.m00290 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 989

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 244 RQPIPGPGRSSTWALPWMHR*H 309
           R  +PG G S    LPW HR H
Sbjct: 332 RTSVPGVGNSKGVLLPWFHRKH 353


>At4g24260.1 68417.m03481 endo-1,4-beta-glucanase, putative /
           cellulase, putative similar to
           endo-1,4-beta-D-glucanase; cellulase GI:5689613 from
           [Brassica napus]
          Length = 620

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 352 INAARSRTDFICGRNVIDASRVTP-RYLTFLAQGWVV 245
           INAA S TD    RN+ D  R TP R L    Q W++
Sbjct: 13  INAADSMTDDDRSRNLQDLDRATPSRPLDETQQSWLL 49


>At2g19660.1 68415.m02297 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 662

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 456 RVSHERALCKFCKVSPCSEGTFYS 385
           R+ HE  LCK C    CS+  FYS
Sbjct: 385 RILHESTLCKACVFQICSD-AFYS 407


>At4g19160.3 68417.m02827 expressed protein
          Length = 454

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 386
           R  K   +TLD   ++   + + R   AF++  +Y  +CKR
Sbjct: 212 RGFKRTSITLDPENSYLHSVLNCRCSTAFLISVIYIEVCKR 252


>At4g19160.2 68417.m02826 expressed protein
          Length = 453

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 386
           R  K   +TLD   ++   + + R   AF++  +Y  +CKR
Sbjct: 212 RGFKRTSITLDPENSYLHSVLNCRCSTAFLISVIYIEVCKR 252


>At4g19160.1 68417.m02828 expressed protein
          Length = 312

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 264 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 386
           R  K   +TLD   ++   + + R   AF++  +Y  +CKR
Sbjct: 71  RGFKRTSITLDPENSYLHSVLNCRCSTAFLISVIYIEVCKR 111


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,976,514
Number of Sequences: 28952
Number of extensions: 246268
Number of successful extensions: 493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)