Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20093
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.037
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    28   0.26 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.2  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   4.2  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   5.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.6  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   7.4  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   7.4  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    23   9.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 0.037
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +3

Query: 348 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSLL---QDHVTE 515
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +SLL   Q  V  
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLLLLVQTAVRT 522

Query: 516 DKQYLKL 536
           D++Y  L
Sbjct: 523 DERYKPL 529



 Score = 23.0 bits (47), Expect = 7.4
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = +3

Query: 336 RADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVTE 515
           R   Q  +Q+   + Q  +  + QQ   +  Q+Q QQ+       +  +QQ   Q H  +
Sbjct: 306 RQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365

Query: 516 DKQY 527
            +Q+
Sbjct: 366 QQQW 369



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 348 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESL 455
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQL 227


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 72  LTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 167
           L P  HQE MT WR     +      RP +P+
Sbjct: 100 LAPMSHQETMTLWREVAAALDGKAKCRPRTPS 131


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 151  LVFTNDDTHIQLLR---QYVISSWCKCGVRSQRTHGEDEGKQS 32
            LV  N+   +QL      +++S+WC   +    TH  D  K S
Sbjct: 1408 LVNLNNQKRVQLTGAKVHHIMSNWCYAEMTIDTTHTADGSKLS 1450


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 156 AVSYSPMTTLIYSCSASTSSVLGASVA 76
           A+S SP++   +  SASTS+   ASV+
Sbjct: 87  ALSLSPVSVSKFDTSASTSNSSNASVS 113


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 79  GVRSQRTHGEDEGKQSQSH 23
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 122 YMSVVIGEYETAIAKCSEYLKEKKGEV 202
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 VTPKTKPARKSPGSLPP 472
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 72  LTPHLHQELMTYWRSSC 122
           + P     L +YWRSSC
Sbjct: 6   ILPESQPILYSYWRSSC 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,604
Number of Sequences: 2352
Number of extensions: 12704
Number of successful extensions: 49
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)