Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20093
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.73 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   0.97 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   0.97 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   0.97 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 274 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 417
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 155 AIAKCSEYLKEKKGEVIKEAVKRLIEN 235
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 155 AIAKCSEYLKEKKGEVIKEAVKRLIEN 235
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 155 AIAKCSEYLKEKKGEVIKEAVKRLIEN 235
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 455 PGSLPPCWKTTEFTSRSCHRGQTVPEA 535
           PG   P WK+        H+   VP++
Sbjct: 216 PGEGLPMWKSDTSDGPESHQNSNVPKS 242


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 348 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQE 449
           Q H+Q+      V    +PQQ   +  Q+Q QQ+
Sbjct: 422 QQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQ 455


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 504 DLEVNSVVFQHGGKLPGD 451
           +L+  +V+F+HG ++P +
Sbjct: 1   ELKQINVIFRHGDRIPDE 18


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -3

Query: 504 DLEVNSVVFQHGGKLPGD 451
           +L+  +V+F+HG ++P +
Sbjct: 16  ELKQINVIFRHGDRIPDE 33


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 390  RPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVTEDKQ 524
            R  + QQ     +Q+Q QQ+   +   +  +QQ   Q H   +++
Sbjct: 1196 RGLQEQQRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQHQARERE 1240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,741
Number of Sequences: 438
Number of extensions: 3676
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)