Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20092
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 77 2e-14
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 75 6e-14
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 63 3e-10
04_01_0037 + 444239-444667,444817-444825 46 2e-05
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 46 4e-05
04_01_0038 + 446314-446787,446829-447350 44 1e-04
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 42 5e-04
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 42 7e-04
04_01_0036 + 436592-437572 37 0.019
04_01_0035 - 433848-434372,434905-435381 36 0.044
02_01_0012 - 80014-80104,80190-80308,80480-80524,80726-80911,810... 32 0.55
01_01_0038 + 288522-288572,289395-289512,289790-289809,290077-29... 31 0.95
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 31 1.3
12_01_1073 + 11135853-11137388,11137627-11137846,11137990-111381... 30 1.7
07_01_0305 - 2181727-2184793,2185635-2185945 30 1.7
08_02_1327 - 26165045-26165116,26165368-26165375,26166696-26167056 30 2.2
03_01_0183 - 1474202-1474276,1474511-1474627,1474791-1474847,147... 30 2.2
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 29 2.9
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 29 2.9
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 29 2.9
01_07_0311 + 42667114-42667132,42667336-42667367,42667449-426678... 29 3.9
09_02_0252 - 6315834-6315959,6316074-6317018 29 5.1
08_01_1016 - 10280918-10281171,10281319-10281460 29 5.1
04_01_0033 + 391565-391974,393484-393520,394959-395483 29 5.1
02_05_0811 + 31939414-31939660,31939766-31940181 29 5.1
01_01_0215 - 1838452-1838685,1839125-1839240,1840200-1840734 29 5.1
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 28 6.7
10_01_0320 + 3506183-3507109 28 6.7
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 6.7
03_01_0142 + 1133064-1133999 28 6.7
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 28 8.9
08_01_0637 + 5537421-5539547 28 8.9
06_03_0854 + 25400855-25403741,25406174-25407708 28 8.9
02_05_1010 + 33477878-33478446,33478709-33478834,33478905-334791... 28 8.9
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/72 (47%), Positives = 49/72 (68%)
Frame = +2
Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNAL 445
+L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A +L
Sbjct: 134 RLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHAIALLAAMARNVAQADASL 193
Query: 446 KAGRWDRALYTG 481
KAG+W R Y G
Sbjct: 194 KAGKWQRNKYVG 205
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +3
Query: 84 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLTQA 263
+VL+ + +G ELL + +++ EEL ++ DALVVRSAT+VT+EV A
Sbjct: 73 TVLVTEKLGDAGLELLRRFANVDCAY-ELTAEELRAKVSLVDALVVRSATRVTREVFEAA 131
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 508 LLGLGRVGREVATRMYAFGMNIIGFDPFVSADQ 606
++G G+VG EVA R GM+II DP+ D+
Sbjct: 215 IMGFGKVGSEVARRAKGLGMDIISHDPYAPVDR 247
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 74.9 bits (176), Expect = 6e-14
Identities = 33/75 (44%), Positives = 51/75 (68%)
Frame = +2
Query: 257 AGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAS 436
+G +L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ ++R++ A
Sbjct: 131 SGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSRNIAQAD 190
Query: 437 NALKAGRWDRALYTG 481
+LKAG+W R Y G
Sbjct: 191 ASLKAGKWQRNKYVG 205
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 508 LLGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELED 645
+LG G+VG EVA R GM++I DP+ SAD+ + +ED
Sbjct: 215 ILGFGKVGSEVARRAKGLGMHVIAHDPYASADRAHAIGVELVSMED 260
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 84 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEV 251
+VL+ + +GA ELL + + +S EEL +IP DAL+VRS T+V ++V
Sbjct: 73 TVLVAEKLGAAGLELLRGFANVDCSYG-LSPEELRAKIPLCDALIVRSGTKVGRDV 127
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Frame = +2
Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNAL 445
+L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A AL
Sbjct: 140 RLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAAL 199
Query: 446 KA------------GRWDRALYTG 481
KA G+W R Y G
Sbjct: 200 KAVYSRTLTVFTAQGKWQRTKYVG 223
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 508 LLGLGRVGREVATRMYAFGMNIIGFDPFVSADQ 606
++G G+VG EVA R GM++I DP+ AD+
Sbjct: 233 VMGFGKVGSEVARRAKGLGMHVIAHDPYAPADR 265
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 168 ISKEELLMEIPNHDALVVRSATQVTKEVL 254
+S ELL ++ DAL+VRS T+VT+EVL
Sbjct: 106 MSPAELLAKVAQFDALIVRSGTKVTREVL 134
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNAL 445
KL++V GVD+ID+D+ ++G+ V NA A + L++ + R V A L
Sbjct: 68 KLEIVVATSTGVDHIDLDACRRRGISVTNAGEVFAPDVADYAVGLVVAVLRRVAAAEAYL 127
Query: 446 KAGRW 460
+ GRW
Sbjct: 128 RRGRW 132
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 239 DQRGVDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 418
D +DA L++V G+D +D+D+ ++GV V N P +L L + R
Sbjct: 60 DAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDDVADLAVGLAIAALR 119
Query: 419 HVVPASNALKAGRW 460
+ A ++AG+W
Sbjct: 120 KIPQADRYVRAGKW 133
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 251 VDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVP 430
+DA L++V + AGVD+I++ + ++G+ V NA A + A + L++ + R V
Sbjct: 66 IDALPALELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAADYAVGLLVAVLRRVAA 125
Query: 431 ASNALKAGRWDRA 469
A ++ G W A
Sbjct: 126 ADAYVRRGAWAAA 138
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 269 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNALK 448
L+++ AG G D+ID+ +A G+ V G+N +S E +L+L R+ +P + +
Sbjct: 114 LELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIV 173
Query: 449 AGRWDRA 469
G W+ A
Sbjct: 174 NGEWNVA 180
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 269 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNALK 448
L+++ AG G D+ID+ +A G+ V G+N +S E +L+L R+ +P +
Sbjct: 133 LELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVV 192
Query: 449 AGRWDRA 469
G W+ A
Sbjct: 193 HGEWNVA 199
>04_01_0036 + 436592-437572
Length = 326
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 251 VDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVP 430
+DA L+ + AG ++ID+ ++GV V NA G + + L+L + RHV
Sbjct: 68 LDAVPSLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLLDVLRHVSA 127
Query: 431 ASNALKAG 454
++ G
Sbjct: 128 GDRFVRRG 135
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 251 VDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVP 430
+DA L V GAGVD+ID+ ++GV V A + + L++ + R +
Sbjct: 79 LDAVPSLGCVVTTGAGVDHIDLAECARRGVAVAGAGTVFSTDVADHAVGLLVDVLRRISA 138
Query: 431 ASNALKAGRW 460
+ ++ G W
Sbjct: 139 SDRYVRRGLW 148
>02_01_0012 -
80014-80104,80190-80308,80480-80524,80726-80911,
81027-81101,81213-81304,81731-81803,81923-82004,
82096-82217,82249-82440,82682-82804
Length = 399
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 17/73 (23%)
Frame = +2
Query: 296 GVDNIDVDSAGKKGVGVINAPGANAL-----------------SACELTCTLMLVLARHV 424
G +N+DV++A + G+ V N P ++A + EL +L L AR +
Sbjct: 68 GYNNVDVEAANRNGIAVGNTPVSSAALCFLISRLSYWMGVLTETTAELAASLSLAAARRI 127
Query: 425 VPASNALKAGRWD 463
V A ++AG +D
Sbjct: 128 VEADQFMRAGLYD 140
>01_01_0038 +
288522-288572,289395-289512,289790-289809,290077-290109,
290648-290779,290859-290948,291402-291527
Length = 189
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 41 TTIALPNQDGRGH*VGFDRRRGWRQVCRTPKRLRNRHHHQGQDLQGRTSYGDTQPRRSGC 220
T + +P++ + +R R RQV + + L+ + + L+ + GD QP
Sbjct: 94 TELRIPDRASSSEIIIMERNRKIRQVEKEMEELKKQRDNAQSKLELQKKMGDNQPAARRL 153
Query: 221 AFSNSSDQRGVDAGVKLKV 277
+ S QR + G K K+
Sbjct: 154 REALSGAQRTISRGPKAKL 172
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGA---NALSACELTCTLMLVLARHVV 427
++KV+ + G G++ +DV++A + + V G+ NA+S E+ L L + R V
Sbjct: 61 QMKVIMQYGVGIEGVDVNAATEHKIKVARINGSTTGNAVSCAEMAIYLTLGILRKQV 117
>12_01_1073 +
11135853-11137388,11137627-11137846,11137990-11138178,
11138257-11138457,11138547-11139246,11163479-11164106
Length = 1157
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 607 CAQFHCTKMELEDIWL*RTTSPCTLRFIESTRNFINADVF 726
C++ HC +++LE+IW R C R S +NF+ + F
Sbjct: 672 CSERHCRRLKLENIWR-RAIGKCQSR---SAKNFLRKEGF 707
>07_01_0305 - 2181727-2184793,2185635-2185945
Length = 1125
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 110 RQVCRTPKRLRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSSDQRGVDAGVKLKVVGRA 289
R++ + L++R G+ R YG PR A + ++ +RG G+ + + A
Sbjct: 112 RRIATRIRELKSRACDVGER---RRRYGVVVPRTRNNAAAAAAARRGGQRGLAKRQLSEA 168
Query: 290 GAGVDNIDVDSAG 328
G G + D SAG
Sbjct: 169 GGGDHHADASSAG 181
>08_02_1327 - 26165045-26165116,26165368-26165375,26166696-26167056
Length = 146
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = -1
Query: 687 EAECAG*CSPLKPNVLQLHLGAMELGALISRHERVESDDVHAEGVHPSGHLAADPAKAKE 508
EAECAG CS + V ++ LG + +S +R + + +H G++ + +
Sbjct: 67 EAECAGGCSDARSGVGKVGLGKIR----VSVSDREVDRSLFSPFIHARGYIDRIGGE-ND 121
Query: 507 ARVLPASSLPVYRARSHL 454
+V P S+L +R S L
Sbjct: 122 NKVSPPSALNRFRRASRL 139
>03_01_0183 -
1474202-1474276,1474511-1474627,1474791-1474847,
1475149-1475196,1475313-1476101,1476516-1476646,
1476769-1476937,1477954-1478541
Length = 657
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 442 AEGW--QVGPGSVHWQRARWQDPRLLGLGRVGREVATRMYAFGMNIIGFDPFVSAD 603
A GW V P +R R ++G R +ATR AF M+++ FDP SA+
Sbjct: 143 AAGWLGSVQPMCRGMRRCRGLVLGIIGRSAAARCLATRSLAFRMDVLYFDPRHSAN 198
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 448 GW--QVGPGSVHWQRARWQDPRLLGLGRVGREVATRMYAFGMNIIGFDPFVSAD 603
GW V P +R R ++G+ R +ATR AF M+++ FDP A+
Sbjct: 155 GWLGSVQPLCRGMRRCRGLVLGIVGVNAAARCLATRSLAFSMSVLYFDPLHEAN 208
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 173 QGRTSYGDTQPRRSGCAFSNSSDQRGVD 256
Q R + G+ +PRRSG FS+ D++G D
Sbjct: 354 QLRRNDGEKRPRRSGEKFSDDLDEQGTD 381
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/86 (24%), Positives = 34/86 (39%)
Frame = +2
Query: 2 PDARRRRTPASSLTTIALPNQDGRGH*VGFDRRRGWRQVCRTPKRLRNRHHHQGQDLQGR 181
PD+ +P+S+ + P++ R G RR+ + R HHH+ R
Sbjct: 33 PDSASSPSPSSASSPSRSPDRRSRSRSSGSKRRKA-----SSSSRRHRHHHHKSSGRSRR 87
Query: 182 TSYGDTQPRRSGCAFSNSSDQRGVDA 259
+ D + RR +RG DA
Sbjct: 88 SRDDDDERRRRRRRRDEERGRRGGDA 113
>01_07_0311 +
42667114-42667132,42667336-42667367,42667449-42667822,
42667895-42668028,42668147-42668303,42668994-42669098,
42669342-42669645,42670404-42670478,42671467-42672589,
42673686-42673727,42674017-42674111,42674199-42674239,
42674375-42674414
Length = 846
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 513 KEARVLPASSLPVYR-ARSHLPAFSALEAGTTWRARTNINVQV 388
K RV A SLP+ + ARS + SAL+AG WR ++ +
Sbjct: 395 KMLRVKIAHSLPLDQIARSIIRGLSALKAGRIWRVGNGSSIDI 437
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = -1
Query: 426 TTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAP 289
TT R R +VSS LS+ PG P P P STS TP+P
Sbjct: 21 TTRRPRRRTR-EVSSRYLSSTTPG----PVPSSPRLSTSSSRTPSP 61
>08_01_1016 - 10280918-10281171,10281319-10281460
Length = 131
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Frame = +2
Query: 146 RHHHQGQDLQGRTSYGDTQPRRSGCAFSNSSDQRGVDAGVKLKVVGRAGAGVDNIDVDSA 325
R H ++L G+ PR+ G G AGAG +
Sbjct: 38 RPHLHVEELHGKKLMEIQVPRKLGHEVKVPKRMAIAHKGGSAGAAAAAGAGGGGVSESRP 97
Query: 326 --GKKGVGVINAPGANALSACELTCTLML 406
GK G + AP ++ A +TC +L
Sbjct: 98 RNGKNGAATLPAPATTSILALAITCAAVL 126
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 254 DAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINA 355
DA L+ V AGVD+ID+ ++GV V N+
Sbjct: 76 DAVPSLRCVVSTAAGVDHIDLAECARRGVVVANS 109
>02_05_0811 + 31939414-31939660,31939766-31940181
Length = 220
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 705 VSSRLNEAECAG*CSPLKPNVLQLHLGAMELGALISRHERVESDDVHAEG 556
V L + G S L+P + A GA + RHER ESDD G
Sbjct: 16 VEQLLAASPAQGAASALRPVAVAGGSRAYNTGAQLRRHERDESDDDSGRG 65
>01_01_0215 - 1838452-1838685,1839125-1839240,1840200-1840734
Length = 294
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 182 TSYGDTQPRRSGCAFSNSSDQRGVDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPG 361
T+ G T+ RR + D+ G+D G + ++ G+ + D S+G GVG +A
Sbjct: 38 TAEGLTRRRRPRSWGTRLGDRGGLDDGDRRRLSDGDRGGLSDDDGGSSGGDGVGGGSASS 97
Query: 362 ANALSAC 382
A + AC
Sbjct: 98 ACSPPAC 104
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 161 GQDLQGRTSYGDTQPRRSGCAFSNSSDQRGVDAGVKLKVVGR 286
G LQ + TQ G AF+++S RG D G + +GR
Sbjct: 1036 GPTLQNSYAGDPTQQASGGVAFASNSGGRGNDGGGNSRGIGR 1077
>10_01_0320 + 3506183-3507109
Length = 308
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 487 LAASVQSPVPPASLQRIGSWDH--VASQNQHQRAGQLA-RAQRIGARSVDHSDAL 332
+AA +P PPAS +R + DH AS++ A A R +R SVD + L
Sbjct: 1 MAAPAPAPAPPASRKRAAAPDHEPTASRSSTPAAAAGAKRPRRYALASVDDYEQL 55
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 375 LSALAPGALITPTPFLPAESTSMLSTPAPA 286
++A+AP +L TP LP+ S ++ P PA
Sbjct: 1 MAAVAPPSLSTPVTILPSVSVALPPLPPPA 30
>03_01_0142 + 1133064-1133999
Length = 311
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -1
Query: 564 AEGVHPSGH-LAADPAKAKEAR-VLPASSLPVY---RARSHLPAFSALEAGTT 421
A H GH AA A A AR +LP SS P+Y R +H + A A T+
Sbjct: 166 APWAHHHGHGAAAAAAAAAGARFLLPPSSTPIYDHHRRHAHAVGYDAYAAATS 218
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 470 EPGPTCQPSAHWKLGPRGEPEPTSTCRSARTRSAHWRP 357
+P P+ + S HW P GE T + + S +W P
Sbjct: 223 DPDPS-RASIHWLSSPSGEVPGTCSTKCTNEASVNWLP 259
>08_01_0637 + 5537421-5539547
Length = 708
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSA--CELTCTLMLVLARH 421
+L ++GR G G D +DV VG + A+ L A TC L++ +RH
Sbjct: 285 QLVILGREGHGYDRLDVAVTYVLLVGAVILETASLLRAMFSSWTCPLLVRWSRH 338
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 549 PSGHLAADPAKAKE--ARVLPASSLPVYRARSHLPAFSALEA 430
P+ A PA + E A V PAS P Y A + PA +ALEA
Sbjct: 394 PASAAAHAPALSVEPDALVSPASIAPAYAAPAPAPAPAALEA 435
>02_05_1010 +
33477878-33478446,33478709-33478834,33478905-33479190,
33479293-33479484,33479641-33479870,33480379-33480718,
33481673-33481789,33481940-33482014
Length = 644
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 606 LISRHERVESDDVHAEGVHPSGHLAADPAKAKEARVLPASSLPVYRARSHLPAFSA 439
L S R +DD H H A EAR A++ + SH PA+S+
Sbjct: 486 LSSSRSRYTNDDEHDARQHAGNEEQPAEAPETEARRADAAAAALLDCLSHYPAYSS 541
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,437,617
Number of Sequences: 37544
Number of extensions: 436044
Number of successful extensions: 1859
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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