Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20092
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...    88   7e-18
U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    33   0.21 
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    32   0.37 
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    32   0.37 
Z49131-6|CAA88979.1|  297|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    29   4.5  
AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical...    29   4.5  
AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    29   4.5  
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   6.0  

>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 42/74 (56%), Positives = 54/74 (72%)
 Frame = +2

Query: 266 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASNAL 445
           KLK+VGRAG GVDNIDV +A    + V+N P AN+ SA ELTCTL+L L+RHV  A+ ++
Sbjct: 69  KLKLVGRAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASM 128

Query: 446 KAGRWDRALYTGSE 487
           KAG+W R  + G E
Sbjct: 129 KAGKWARKDFMGEE 142



 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +3

Query: 66  MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 245
           M   I  VLI D +  +C ++L   GI  T K K +K+ELL+ +P HDA++VRSAT++T 
Sbjct: 1   MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60

Query: 246 EVL 254
           E+L
Sbjct: 61  ELL 63



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = +1

Query: 508 LLGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWL*RTTSPCTLRF 687
           +LGLGR+G EVA R+ AFGM +IGFDP V+ +Q    +   + LE IW         +  
Sbjct: 150 VLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIWPQADYITVHVPL 209

Query: 688 IESTRNFINAD 720
           I+ T N IN +
Sbjct: 210 IKQTENLINKE 220


>U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical
           protein F49E10.5 protein.
          Length = 727

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +2

Query: 269 LKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 418
           LKVV R G G+DNIDV +A + G+ V +APG       + T +L+L L R
Sbjct: 243 LKVVFRIGYGIDNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFR 292



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = +1

Query: 454 QVGPGSVHWQRARWQDPRLLGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKM 633
           QV   +V  ++ R     +LG GRVG  V  R  AFG++II +DPFV           ++
Sbjct: 312 QVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERV 371

Query: 634 ELEDIWL*RT---TSPCTLRFIESTRNFINAD 720
              D ++ R+   +  C L   + TR  INAD
Sbjct: 372 YTMDEFMSRSDCISLHCNLG--DETRGIINAD 401


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 507 ARVLPASSLPVYRARSHLPAFSALEAGTTWRARTNINVQVSSHALSAL-APGALITPTPF 331
           AR LPA  LP    R++L    A  A    ++   I + +    L+ L +PGA  T  P 
Sbjct: 170 ARGLPAPPLPEGLHRTNLSVIGATSAQPE-KSEAEIALSLPVPPLTPLPSPGAQSTAPPV 228

Query: 330 LPAESTSMLSTPAP 289
            P  + +  STP P
Sbjct: 229 FPTSTPTPTSTPTP 242


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 23/76 (30%), Positives = 28/76 (36%)
 Frame = -1

Query: 549  PSGHLAADPAKAKEARVLPASSLPVYRARSHLPAFSALEAGTTWRARTNINVQVSSHALS 370
            P     A P  +  A   P    P Y+A +  PA S  +      A        SSH   
Sbjct: 1213 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1271

Query: 369  ALAPGALITPTPFLPA 322
              AP A  TPTP  P+
Sbjct: 1272 IAAPQARFTPTPGAPS 1287


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 23/76 (30%), Positives = 28/76 (36%)
 Frame = -1

Query: 549  PSGHLAADPAKAKEARVLPASSLPVYRARSHLPAFSALEAGTTWRARTNINVQVSSHALS 370
            P     A P  +  A   P    P Y+A +  PA S  +      A        SSH   
Sbjct: 1233 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1291

Query: 369  ALAPGALITPTPFLPA 322
              AP A  TPTP  P+
Sbjct: 1292 IAAPQARFTPTPGAPS 1307


>Z49131-6|CAA88979.1|  297|Caenorhabditis elegans Hypothetical
           protein ZC373.7 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 488 ARCQCTEPGPTCQPSAHWKLGPRGEP 411
           A CQC    PTC P      GP G+P
Sbjct: 92  AWCQCEPTKPTCPPGPPGPPGPAGQP 117


>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
           protein T16G12.5 protein.
          Length = 1142

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
 Frame = -1

Query: 549 PSGHLAADPAKA-KEARV-LPASSLPVYRARSH-LPAFSAL--EAGTTWRARTNI-NVQV 388
           PS  LA+ P  A KE ++ +P  + PVYRAR++  P F  L  +  +T+R   +I  + +
Sbjct: 12  PSKILASKPPDAQKEIKIQMPVKTNPVYRARTNTFPLFFGLHYQHRSTFRLICDILYLAI 71

Query: 387 SSHALSALAPGAL 349
            +H L  +A  A+
Sbjct: 72  YAHLLECIAVYAI 84


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
            C47E8.8 protein.
          Length = 1675

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 600  SRHERVESDDVHAEGVHP 547
            S H R+E+DD+  EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
            protein C47E8.8 protein.
          Length = 1675

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 600  SRHERVESDDVHAEGVHP 547
            S H R+E+DD+  EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493


>AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18b protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 411 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 286
           R+N ++  SS  +    P A   P P +PA + +  STP PA
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPA 190


>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 411 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA 286
           R+N ++  SS  +    P A   P P +PA + +  STP PA
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPA 550


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 482 CQCTEPGPTCQPSAHWKLGPRGEPEPT 402
           CQC    P C P      G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -2

Query: 473 TEPGPTCQPS-AHWKLGPRGEPEPTSTCRSARTRSAHWR 360
           T  GPT +P+ A W+ G  G    TS   + R  +A WR
Sbjct: 390 TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,678,354
Number of Sequences: 27780
Number of extensions: 310714
Number of successful extensions: 1263
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)