Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20091
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   5.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 208 CWAFGAVEAMTDRVCTILTELNIFIFLPRICLVAALFVDWDAAE 339
           C+  G V   + + C+I   L + + +  I   A+ FV W   E
Sbjct: 195 CFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 208 CWAFGAVEAMTDRVCTILTELNIFIFLPRICLVAALFVDWDAAE 339
           C+  G V   + + C+I   L + + +  I   A+ FV W   E
Sbjct: 195 CFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 595 VVFVSGHSIYMFSVLFVLFVINVVSRFAF 509
           +VFV  + IY+F+V ++ + ++  S   F
Sbjct: 143 LVFVFCYFIYLFTVYYIYYSVHEASIINF 171


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 465 CCRVRDVHTEGSRKV 421
           C +  D H EG RKV
Sbjct: 70  CAKCNDKHKEGIRKV 84


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 474 CSGDTKTPKCTKN 512
           C+GD + P C +N
Sbjct: 553 CNGDNRPPDCGQN 565


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,867
Number of Sequences: 336
Number of extensions: 4381
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)