Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20090
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 118 3e-27
04_01_0103 + 1082077-1082167,1083037-1085477 117 5e-27
02_04_0017 + 18937774-18937864,18938505-18940945 117 5e-27
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 109 1e-24
03_05_0511 + 25056018-25059107 85 4e-17
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 85 5e-17
02_04_0148 - 20198407-20201424 79 2e-15
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 4e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 47 9e-06
01_06_0930 + 33134385-33138257 32 0.35
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 1.8
06_01_1138 - 9429447-9433868 29 2.4
01_06_0664 + 30999365-31002089,31002220-31002686 29 3.2
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 28 4.3
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 28 4.3
02_02_0340 + 9135846-9138377 28 5.6
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 7.5
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 7.5
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135... 27 9.9
11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858 27 9.9
07_01_0212 + 1571631-1572149 27 9.9
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 9.9
04_04_0144 - 23095172-23095830,23095915-23097265 27 9.9
02_01_0401 + 2927581-2927669,2927795-2927921,2928354-2928437,292... 27 9.9
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 118 bits (284), Expect = 3e-27
Identities = 60/83 (72%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKS 439
+DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S
Sbjct: 495 SDLPKLVEGLKRLAKSDPMVLCTVEESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVS 554
Query: 440 DPVVSYRETVAEESDQLXLSKSP 508
PVVS+RETV E+S + +SKSP
Sbjct: 555 PPVVSFRETVLEKSCRTVMSKSP 577
Score = 103 bits (248), Expect = 7e-23
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 182
RIMGPN+ PG+K+DLY K +QRT++ MG+ E++E VP GN +VG+DQF+ K T+T
Sbjct: 406 RIMGPNYAPGQKKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNATLTN 465
Query: 183 FK--NAHNMKVMKFSVSPVVRVAVEPK 257
K +A +K MKFSVSPVVRVAV+ K
Sbjct: 466 EKEVDACPIKAMKFSVSPVVRVAVQCK 492
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 499 KVAHKHNRLFMKAQPM 546
K +KHNRL+M+A+PM
Sbjct: 575 KSPNKHNRLYMEARPM 590
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 117 bits (282), Expect = 5e-27
Identities = 60/83 (72%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKS 439
+DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S
Sbjct: 499 SDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVS 558
Query: 440 DPVVSYRETVAEESDQLXLSKSP 508
PVVS+RETV E+S + +SKSP
Sbjct: 559 PPVVSFRETVLEKSCRTVMSKSP 581
Score = 106 bits (254), Expect = 1e-23
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 182
RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T
Sbjct: 410 RIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTN 469
Query: 183 FKNAH--NMKVMKFSVSPVVRVAVEPK 257
K A ++ MKFSVSPVVRVAV+ K
Sbjct: 470 EKEADACPIRAMKFSVSPVVRVAVQCK 496
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 117 bits (282), Expect = 5e-27
Identities = 60/83 (72%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKS 439
+DLPKLVEGLKRLAKSDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S
Sbjct: 499 SDLPKLVEGLKRLAKSDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVS 558
Query: 440 DPVVSYRETVAEESDQLXLSKSP 508
PVVS+RETV E+S + +SKSP
Sbjct: 559 PPVVSFRETVLEKSCRTVMSKSP 581
Score = 105 bits (253), Expect = 2e-23
Identities = 49/87 (56%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 182
RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K T+T
Sbjct: 410 RIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNATLTN 469
Query: 183 FK--NAHNMKVMKFSVSPVVRVAVEPK 257
K +A ++ MKFSVSPVVRVAV+ K
Sbjct: 470 EKESDACPIRAMKFSVSPVVRVAVQCK 496
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 109 bits (262), Expect = 1e-24
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 QNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPI 430
+N ++LPKLVEGLKRLAKSDP+V C EESGEH++AG G+LHLEIC+KDL+ED I
Sbjct: 498 KNASELPKLVEGLKRLAKSDPLVVCTIEESGEHVIAGVGQLHLEICIKDLQEDFMGGAEI 557
Query: 431 KKSDPVVSYRETVAEESDQLXLSKSP 508
P+++YRETV + S + +SKSP
Sbjct: 558 IVGPPIITYRETVTKNSCRTVMSKSP 583
Score = 107 bits (258), Expect = 4e-24
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 182
RIMGPNF PG+K+DLY KT+QRT++ MG+ E+++DVP GN +VG+DQF+ K T+T
Sbjct: 412 RIMGPNFVPGEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNATLTD 471
Query: 183 FK--NAHNMKVMKFSVSPVVRVAVEPK 257
K +AH +K MKFSVSPVVR +V K
Sbjct: 472 EKAVDAHPIKAMKFSVSPVVRKSVACK 498
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 85.0 bits (201), Expect = 4e-17
Identities = 44/96 (45%), Positives = 63/96 (65%)
Frame = +2
Query: 257 NPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKK 436
NPADL LV+GLK L ++DP V+ + GEH++A AGE+HLE C KDLEE A + +
Sbjct: 546 NPADLGALVKGLKLLNRADPFVEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVV 605
Query: 437 SDPVVSYRETVAEESDQLXLSKSPTSTTVYS*RLSP 544
SDP+VS++ET+ E + L L +S + + R +P
Sbjct: 606 SDPLVSFKETI--EGEGLALIESLKAPREFVERTTP 639
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +3
Query: 6 IMGPNFTPGKKEDLY----EKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGT 173
++ P + P K E + E +Q M+G+ + + V +GN+ + G+ ++K+ T
Sbjct: 458 VLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVCAGNVVAIQGLGHHILKSAT 517
Query: 174 ITTFKNAHNMKVMKFSVSPVVRVAVEP 254
+++ KN M F VSP+++VA+EP
Sbjct: 518 LSSTKNCWPFSSMMFQVSPMLKVAIEP 544
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 257 NPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKK 436
NP++LPK+VEGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K
Sbjct: 620 NPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKV 679
Query: 437 SDPVVSYRETVAEESDQLXLSKSP 508
+DPVV++ ETV + S +++P
Sbjct: 680 ADPVVTFCETVVDTSSMKCFAETP 703
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 182
R++G ++P +ED+ K + + + RY I P+G+ + GVD ++KT TI
Sbjct: 532 RVLGEGYSPDDEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICP 591
Query: 183 FK---NAHNMKVMKFSVSPVVRVAVEP 254
K + + + ++F+ PVV++A EP
Sbjct: 592 MKMDEDVYIFRPLRFNTLPVVKIAAEP 618
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/74 (45%), Positives = 54/74 (72%)
Frame = +2
Query: 257 NPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKK 436
NP+DL LV+GLK L ++DP ++ E GEH++A AGE+HLE C+K+L+E A + ++
Sbjct: 526 NPSDLGALVKGLKLLNQADPFIEYTVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEV 585
Query: 437 SDPVVSYRETVAEE 478
S P+VS+++T+ E
Sbjct: 586 SKPLVSFKDTIQGE 599
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = +3
Query: 33 KKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVM 212
+++ L E +Q MMG +E + V +G++ + G+ ++K T+++ KN M
Sbjct: 451 QQKHLQEVELQHLYQMMGPDLEIVSAVRAGDVLAIEGLGHHVLKNATLSSTKNCQPFSGM 510
Query: 213 KFSVSPVVRVAVEP 254
F VSP+++VA+EP
Sbjct: 511 MFQVSPMLKVAIEP 524
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 284 EGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 460
+ L R K DP + ++ ESGE I++G GELHL+I ++ + ++ + K P V++R
Sbjct: 496 KALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFR 554
Query: 461 ETVAEESD 484
ET+ + ++
Sbjct: 555 ETITQRAE 562
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 ADLPKLVEGLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKS 439
AD K+ GL +LA+ DP +EE+ + ++ G GELHL+I + L+ + +
Sbjct: 469 ADADKMATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRLKREFR-VEANVG 527
Query: 440 DPVVSYRETVAEESD 484
P V+YRE++++ S+
Sbjct: 528 APQVNYRESISKISE 542
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 RIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG-TIT 179
+++ ++ +D E+ I R + M E I +G+I L G+ + TG T++
Sbjct: 385 KLVAGSYVLNANKDKKER-IGRLLEMHANSKEDITVAVAGDIVALAGLKDTI--TGETLS 441
Query: 180 TFKNAHNMKVMKFSVSPVVRVAVEPKT 260
++ M+F PV++VA+EPKT
Sbjct: 442 DPDKPVVLERMEFP-DPVIKVAIEPKT 467
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +3
Query: 27 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFK 188
P + EDL Y+ T+ + L+ G Y E +E N C G + + + + T +
Sbjct: 777 PSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLE 836
Query: 189 NAHNMKVMKFSVSPVVRVAVEPKTLLI 269
N NMK + F + +++E LL+
Sbjct: 837 NVPNMKTLPFLPEGLTSLSIEGCPLLV 863
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 27 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGV--DQFLVKTGTITTFK 188
P + EDL Y+ + + L+ G Y E +E N CG+ + + + + T +
Sbjct: 959 PSQLEDLTIEGYKSAMYPSWLLDGSYFENLESFTLANCCGIGSLPPNTEIFRHCLTLTLE 1018
Query: 189 NAHNMKVMKFSVSPVVRVAVEPKTLLI 269
N NMK + F + +++ LL+
Sbjct: 1019 NVPNMKTLSFLPEGLTSLSIVGCPLLV 1045
>06_01_1138 - 9429447-9433868
Length = 1473
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 146 DSNETTDVTRGHILNSFNITSHHKDCTLDSLLIQVLFLSRC 24
D NE ++ + L F + H KD LD LL + L C
Sbjct: 1012 DGNELKNIRKLWRLRKFGVVIHDKDSHLDKLLRAISDLKEC 1052
>01_06_0664 + 30999365-31002089,31002220-31002686
Length = 1063
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Frame = +2
Query: 164 DWYHHHFQ----------ECPQHEG--DEIQCITSRACRC*AQNPADLPKLVEGLKRLAK 307
DW HH+Q +C ++ G DEI+ + C PA P + + L+ L K
Sbjct: 949 DWARHHYQSGESIPDATDQCIRYAGYSDEIEVVFRLGVMCTGATPASRPTMKDVLQILVK 1008
Query: 308 -SDPMVQCINEESGE 349
S+ Q ESG+
Sbjct: 1009 CSEQTHQKCKAESGQ 1023
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 369 PAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFWA 250
P+P+ D S C GS + + P+T+ AG +A
Sbjct: 342 PSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFA 381
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 209 HLHVVGILESGDGTSLD*ELIDSNETTDVTRGHILNSFNITSHHKDCTLDSLLIQ 45
H+H +LE+ D S D E D N + + I NS +I S D L+ ++++
Sbjct: 212 HVHFTSVLEASDSDSEDGE--DPNNASADEQSTIENSADIPSGDDDEDLEMIVVR 264
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 450 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 346
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 266 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL-KDLEEDHACIPIKKSD 442
DLP+ E + + AK+ NEE E I+ +LH E+C KD + H + +
Sbjct: 684 DLPE--ESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIG 741
Query: 443 P 445
P
Sbjct: 742 P 742
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 357 TMCSPDSSLIHCTMGSDLARRLRPSTSLGRSA 262
+MCS +S HCT D R+RP +L R A
Sbjct: 530 SMCS-ESFSSHCTKSQDSVVRMRPDDTLVRRA 560
>12_01_0183 -
1350451-1350477,1350887-1350969,1350977-1352696,
1354258-1354428,1355892-1355939
Length = 682
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 239 CRC*AQNPADLPKLVEGLKRLAKSDPMV 322
C C QN DLP GL LAK PMV
Sbjct: 454 CSCAQQNGGDLPYSATGL--LAKHTPMV 479
>11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858
Length = 675
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 239 CRC*AQNPADLPKLVEGLKRLAKSDPMV 322
C C QN DLP GL LAK PMV
Sbjct: 439 CSCAQQNGGDLPYSATGL--LAKHTPMV 464
>07_01_0212 + 1571631-1572149
Length = 172
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +2
Query: 140 WSRSVLSQDWYHHHFQECPQHEGD 211
W L DWYHH C G+
Sbjct: 100 WVSPTLDGDWYHHDTNTCTAPAGE 123
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 132 GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKTLLICPS**KVL-NVWLN 308
G+ G+D+ L GT++ ++ ++ +V A K L+ +L ++W
Sbjct: 310 GVSGLDEELTSPGTLSRRSTNETRRISDDTIKEMV--ASSGKKHLLTTEVESILKDLWKK 367
Query: 309 LTPWCSVLMKNQENTLSL 362
+C +L Q+NTLS+
Sbjct: 368 EARFCMLLCDFQQNTLSV 385
>04_04_0144 - 23095172-23095830,23095915-23097265
Length = 669
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 137 RWSRSVLSQDWYHHHFQ-ECPQHEG--DEIQCITSRACRC*AQNPADLPKLVEGLKRL 301
RW+RSV+ ++W F E +H G DE+ + A C P P + E + R+
Sbjct: 578 RWARSVVREEWTSEVFDTELLRHPGAEDEMVEMLRLAMDCTVTVPDQRPAMPEIVVRI 635
>02_01_0401 +
2927581-2927669,2927795-2927921,2928354-2928437,
2928546-2928662,2928754-2928945,2929031-2929234,
2929322-2929809,2930429-2930528,2930686-2930745,
2931007-2931126,2931407-2931751
Length = 641
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 107 LNSFNITSHHKDCTLDSLLIQVLFLSRCKVWSHDA 3
LN F IT HK ++D VLF C ++S A
Sbjct: 493 LNKFKITEEHKKYSIDGTEPLVLFGLSCGMFSSPA 527
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,903,227
Number of Sequences: 37544
Number of extensions: 337405
Number of successful extensions: 867
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -