Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20090
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.71 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.8  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   3.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.6  
AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    23   8.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.71
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 488 AGPIPQLRSHGTTRQGQTS*LECKHG 411
           AGPIP  + H   +Q Q S L  KHG
Sbjct: 244 AGPIPSQQKHQQHQQQQQSVLLPKHG 269


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 444 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 325
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 817 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 854


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 444 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 325
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 818 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 855


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 125  HLWSRWSRSVLS 160
            H+W+RW R  LS
Sbjct: 1639 HIWNRWHREYLS 1650


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 471 ATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSL 331
           + V+    + + +L   Q  SSS S    S  SS + ++  SPDS L
Sbjct: 90  SAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPL 136


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 162 KTGTITTFKNAHNM-KVMKFSVSPVVRVAVEPKTLLICPS**KVLNVWLNLTPWCSVLMK 338
           K G   + +N  N   ++K  +  V+R+  +  TL+  P   K+  V   +   CS++ K
Sbjct: 599 KYGDSKSQRNIFNRYPMLKLMIKDVIRLETQYWTLVEIPKQEKLETVPAFVLRACSIMEK 658

Query: 339 NQEN 350
           +Q++
Sbjct: 659 SQKS 662


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 162 KTGTITTFKNAHNM-KVMKFSVSPVVRVAVEPKTLLICPS**KVLNVWLNLTPWCSVLMK 338
           K G   + +N  N   ++K  +  V+R+  +  TL+  P   K+  V   +   CS++ K
Sbjct: 599 KYGDSKSQRNIFNRYPMLKLMIKDVIRLETQYWTLVEIPKQEKLETVPAFVLRACSIMEK 658

Query: 339 NQEN 350
           +Q++
Sbjct: 659 SQKS 662


>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 170 TSLD*ELIDSNETTDVTRGHILNSF 96
           T  D  L+ S  T DVT GH L+ +
Sbjct: 153 TVADFSLLTSITTIDVTAGHDLSKY 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,357
Number of Sequences: 2352
Number of extensions: 11892
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)