Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20088X
(386 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 1.8
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 3.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 3.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 3.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 3.2
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 21 5.6
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 21 5.6
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 20 7.4
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 20 9.8
AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase l... 20 9.8
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 280 PDPQIPHRTRNRH 318
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 213 PDGGAFPRSRGTRREEQHLLRNRPCT 136
P G F ++ R+E Q + PCT
Sbjct: 669 PSGDCFYENKFYRQEAQWTSSDNPCT 694
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 349 MPNLLHVIPVSDDSVFD 299
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
G YG ++ RN S + K E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 349 MPNLLHVIPVSDDSVFD 299
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
G YG ++ RN S + K E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 349 MPNLLHVIPVSDDSVFD 299
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
G YG ++ RN S + K E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 3.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 349 MPNLLHVIPVSDDSVFD 299
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIV 316
G YG ++ RN S + K E+G V
Sbjct: 1491 GAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHV 1525
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 20.6 bits (41), Expect = 5.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 185 LDRGKAPPSGRD 220
LDRGK P G++
Sbjct: 49 LDRGKCSPDGQE 60
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 20.6 bits (41), Expect = 5.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 185 LDRGKAPPSGRD 220
LDRGK P G++
Sbjct: 49 LDRGKCSPDGQE 60
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 20.2 bits (40), Expect = 7.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 183 GTRREEQHLLRNRP 142
G R+ +HL++N+P
Sbjct: 81 GVRKVIRHLIKNKP 94
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 19.8 bits (39), Expect = 9.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 183 GTRREEQHLLRNRP 142
G R+ HL++N+P
Sbjct: 82 GVRKVLHHLIKNKP 95
>AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase like
protein E3 protein.
Length = 138
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRN 256
SG D YG E LL N
Sbjct: 88 SGNDDIYGPEFLLSEN 103
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,258
Number of Sequences: 336
Number of extensions: 2128
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8119573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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