Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20088X
(386 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 118 7e-29
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 118 7e-29
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 118 7e-29
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 112 5e-27
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 0.73
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 1.3
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 3.9
AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 23 3.9
AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450 CY... 23 3.9
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 23 3.9
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 5.1
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 5.1
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 22 9.0
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (284), Expect = 7e-29
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEDVAAVVVDNGSGMCKAGFAGDVAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDE+VAA+VVDNGSGMCKAGFAGD APRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 100 bits (240), Expect = 2e-23
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 385
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (284), Expect = 7e-29
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEDVAAVVVDNGSGMCKAGFAGDVAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDE+VAA+VVDNGSGMCKAGFAGD APRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 100 bits (240), Expect = 2e-23
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 385
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (284), Expect = 7e-29
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEDVAAVVVDNGSGMCKAGFAGDVAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDE+VAA+VVDNGSGMCKAGFAGD APRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 100 bits (240), Expect = 2e-23
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 385
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 112 bits (269), Expect = 5e-27
Identities = 50/62 (80%), Positives = 55/62 (88%)
Frame = +3
Query: 87 MCDEDVAAVVVDNGSGMCKAGFAGDVAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD+D A+VVDNGSGMCKAGFAGD APRAVFPSIVGRPRHQGVMVGMG KD+YVG +
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 100 bits (240), Expect = 2e-23
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = +2
Query: 230 GTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 385
G + +EAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPE
Sbjct: 49 GNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 100
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.4 bits (53), Expect = 0.73
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 194 GKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLK 292
G+ P GRDG +G GL + + G+ LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 312 IPCSMGYLRVRIPLLLCASFLHKSP 238
I C + Y R+ ++CA++ H+ P
Sbjct: 60 ITCQIAYRRIEGDRIVCAAYSHELP 84
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 81 FKMCDEDVAAVVVDNGSGMC 140
+++C E A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450
CYP4C28 protein.
Length = 150
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 268 QKRYPDPQIPHRTRNRH 318
+K YPD +P + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133
>AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450
CYP4G17 protein.
Length = 151
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 280 PDPQIPHRTRNRH 318
PD +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 185 LDRGKAPPSGRDGRYGTEGLLCRNEAQSK 271
L+R + G G+ T+G CR A K
Sbjct: 81 LERKRRATEGNGGKSSTKGKECRTRAGEK 109
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 200 PSHDRGEHGARSNISC 153
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 371 AAHCRRYDAKSSPCHPS 321
+AH RR+D SSP P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 158 SCETGLAHTGAIVYYHRGNIFVAHLEL 78
S TGLAH + RG +AH +L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDL 188
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,171
Number of Sequences: 2352
Number of extensions: 10410
Number of successful extensions: 30
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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