Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20087
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   6.8  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          23   9.0  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    23   9.0  

>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 486 GKSYRARYGRSVEP 527
           G  Y+ RYGR +EP
Sbjct: 144 GDHYQVRYGRPLEP 157


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 170 YGWKGHLNSNRM 205
           YGWK H N  ++
Sbjct: 122 YGWKNHCNGKKL 133


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 170 YGWKGHLNSNRM 205
           YGWK H N  ++
Sbjct: 122 YGWKNHCNGKKL 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,599
Number of Sequences: 2352
Number of extensions: 11088
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)