Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20086X
         (334 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    29   1.9  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    29   1.9  
AE014298-1095|AAF46302.2| 1470|Drosophila melanogaster CG1531-PB...    28   2.5  
AE014296-2545|AAF49609.2|  896|Drosophila melanogaster CG32149-P...    28   3.4  
AY928610-3|AAX28845.1|  487|Drosophila melanogaster envelope pro...    27   4.4  
AY061584-1|AAL29132.1|  487|Drosophila melanogaster SD03311p pro...    27   4.4  
AJ001516-1|CAC79666.1|  550|Drosophila melanogaster env protein ...    27   4.4  
AY102695-1|AAM27524.1|  325|Drosophila melanogaster LP06328p pro...    27   5.9  
AE013599-473|AAF59214.2|  325|Drosophila melanogaster CG2070-PA ...    27   5.9  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p
           protein.
          Length = 1688

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 131 RCNWWPHSYLRKM 169
           RC WW H Y++KM
Sbjct: 140 RCEWWCHKYIQKM 152


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
           isoform B protein.
          Length = 1688

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 131 RCNWWPHSYLRKM 169
           RC WW H Y++KM
Sbjct: 140 RCEWWCHKYIQKM 152


>AE014298-1095|AAF46302.2| 1470|Drosophila melanogaster CG1531-PB
           protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 266 GDGRHGMQPMRLHCYPRTTLICN 334
           G GRH   P   HCYP   L CN
Sbjct: 291 GTGRHE-PPKLFHCYPTDNLSCN 312


>AE014296-2545|AAF49609.2|  896|Drosophila melanogaster CG32149-PC,
           isoform C protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 162 VKCFSNIRHRGPDAWRIEQDAREPLAILGLQVSLSGTVGTV 284
           V    NIR     A  I+  AR P+A LGL  SL G + T+
Sbjct: 739 VNSVGNIRLSN-SAESIQYAARRPVASLGLNPSLGGAITTI 778


>AY928610-3|AAX28845.1|  487|Drosophila melanogaster envelope
           protein protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 268 PDSETCNPRIANGSLASCSIRHASGPRWRMFE 173
           P + TC   + NG  +SC +R  +GP   +FE
Sbjct: 288 PQNNTCLEHLLNGENSSCDVRE-TGPITDVFE 318


>AY061584-1|AAL29132.1|  487|Drosophila melanogaster SD03311p
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 268 PDSETCNPRIANGSLASCSIRHASGPRWRMFE 173
           P + TC   + NG  +SC +R  +GP   +FE
Sbjct: 288 PQNNTCLEHLLNGENSSCDVRE-TGPITDVFE 318


>AJ001516-1|CAC79666.1|  550|Drosophila melanogaster env protein
           protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 268 PDSETCNPRIANGSLASCSIRHASGPRWRMFE 173
           P + TC   + NG  +SC +R  +GP   +FE
Sbjct: 351 PQNNTCLEHLLNGENSSCDVRE-TGPITDVFE 381


>AY102695-1|AAM27524.1|  325|Drosophila melanogaster LP06328p
           protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 241 FSDCKSRYRGRSARYATDAPTL 306
           FSDCK ++ G +A+Y  DA  L
Sbjct: 292 FSDCKQKHVGSAAQYDDDAQFL 313


>AE013599-473|AAF59214.2|  325|Drosophila melanogaster CG2070-PA
           protein.
          Length = 325

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 241 FSDCKSRYRGRSARYATDAPTL 306
           FSDCK ++ G +A+Y  DA  L
Sbjct: 292 FSDCKQKHVGSAAQYDDDAQFL 313


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,516
Number of Sequences: 53049
Number of extensions: 288470
Number of successful extensions: 699
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)