Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20083
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    30   0.065
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    30   0.065
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    30   0.065
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 29.9 bits (64), Expect = 0.065
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -1

Query: 439 KEQRPH-QLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQ 269
           KE   H QLE      +QQ+  Q  QH      +++     QH +P +  H H  HHQ
Sbjct: 233 KELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 0.065
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -1

Query: 439 KEQRPH-QLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQ 269
           KE   H QLE      +QQ+  Q  QH      +++     QH +P +  H H  HHQ
Sbjct: 233 KELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 0.065
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -1

Query: 439 KEQRPH-QLEVHYLVGEQQSVLQDPQH*VQPVLETKFDD*LQHSRPCYIRHQHRRHHQ 269
           KE   H QLE      +QQ+  Q  QH      +++     QH +P +  H H  HHQ
Sbjct: 185 KELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 242


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 135 SCPNAIRSPEASTILPS 185
           SC N I+SP+A ++L S
Sbjct: 871 SCVNCIKSPKAVSVLNS 887


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 411 FITLWENNRVYFKIHNTKYNQYLKLSSTT 325
           FI+ W+   VY+ +H   YN+   +S  T
Sbjct: 392 FISHWQEEGVYWSLHYL-YNRLRDISEET 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,350
Number of Sequences: 2352
Number of extensions: 11363
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)