Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20082
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 36 0.037
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 1.0
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 31 1.4
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 30 1.8
07_01_0039 - 306384-306551,306645-306749,306845-306949,307030-30... 30 2.4
04_03_1034 - 21865633-21865811,21865838-21865860,21866345-218664... 30 2.4
05_07_0144 - 28007477-28008412 29 3.2
01_04_0072 - 15721866-15723563 29 5.6
01_04_0070 - 15704794-15706491 29 5.6
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 28 7.4
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 28 7.4
08_02_0009 + 11216532-11218687,11220727-11225998 28 7.4
08_02_0003 + 11180421-11180757,11180773-11185715 28 7.4
08_02_0002 + 11173365-11173512,11173528-11178470 28 7.4
06_01_1188 + 10219546-10219664,10220855-10223660 28 9.7
04_04_0811 - 28246801-28247049,28247161-28247384,28248236-282484... 28 9.7
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 28 9.7
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 248 RQMERHEFREKML--GEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEER 421
++ E+ F +KM + + K + LDKK L LK ISRL ++ + ++ ++
Sbjct: 282 KKKEQSGFLKKMTLCEKSIAKKKLELDKKQPELLRLKEQISRLKSKIKSCN----KEIDK 337
Query: 422 EKGSQKKTDEALESIQKSILALTTTVTE 505
+K KK E ++S+Q +++ +T + E
Sbjct: 338 KKDDSKKHLEEMKSLQSALVDVTRAIDE 365
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 290 EQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEAL 457
EQ+ + LD+ E L+G I+ L+ +L+ +++L Q E+ +Q EAL
Sbjct: 363 EQILNLQTELDESKGGNETLRGTIADLNSKLAERDSLLRQAEDEHAKAQLLLSEAL 418
>06_03_0640 -
23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 478 TSSNDDS-HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAV--KTQIDNLKNT 639
T ++D S H E KE+ N+E D + + GN + L T+ + + +D+LK+T
Sbjct: 457 TKTDDKSVHTEEKESDNSEQDGVIVTGGNNMPSNLEHTENEKTDLMQELMVDDLKDT 513
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 535 DSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITE 648
+SKL+S +LE R+N ++ RL AV+ Q ++ + +E
Sbjct: 605 ESKLKSQIASLESRVNISEGRLSAVREQAESAQEEASE 642
>07_01_0039 -
306384-306551,306645-306749,306845-306949,307030-307111,
307457-307656,307754-307915,308043-308152,308255-308594,
308675-308749,308823-309032,309140-309343,309443-309562,
309643-309752,309832-309976,310716-310943
Length = 787
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 493 DSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITE 648
+S+ ++ KN E +KL+ NT+ +N +VK Q+D K++ E
Sbjct: 223 NSNLQADATKNGETIAKLQKEKNTMVETMNGLKDHANSVKMQLDLAKSSQNE 274
>04_03_1034 -
21865633-21865811,21865838-21865860,21866345-21866433,
21872484-21872894,21872968-21873284,21873389-21873467,
21873539-21873903,21874484-21874656,21874824-21874913,
21875797-21875862,21876615-21876661
Length = 612
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 502 RESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTIT 645
+E KE KN + E + L LN R A+K Q+D NTI+
Sbjct: 499 KEGKEKKNIYANKMGEGKLDALIGSLNVKGIRERALKRQLDKFYNTIS 546
>05_07_0144 - 28007477-28008412
Length = 311
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 344 PLKGMISRLDQRLSNVETILLQKEER---EKGSQKKTDEAL 457
PL M L +RLSN TI+ QKE ++G Q K D A+
Sbjct: 235 PLDVMAMELTRRLSNCHTIIRQKETTRLVDRGVQVKDDVAV 275
>01_04_0072 - 15721866-15723563
Length = 565
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 460 KYPEIYTSSNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNL 630
K +IYT ++D + RES N + V + GN E N+ A + V + NL
Sbjct: 263 KVADIYTMTSDQNRRESSNNAASNVANHKNINGN--EENANSKPAAQDKVLSASANL 317
>01_04_0070 - 15704794-15706491
Length = 565
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 460 KYPEIYTSSNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNL 630
K +IYT ++D + RES N + V + GN E N+ A + V + NL
Sbjct: 263 KVADIYTMTSDQNRRESSNNAASNVANHKNINGN--EENANSKPAAQDKVLSASANL 317
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTI-----TEDNLR- 660
H ES+ E +K++ L LNA+ E + T +DN++ +I EDNLR
Sbjct: 1085 HYESQLEDLRESKTKIKD----LVDSLNASKQNEEMLTTDVDNMRRSIEAARSNEDNLRK 1140
Query: 661 TLCQ 672
TLC+
Sbjct: 1141 TLCE 1144
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 347 LKGMISRLDQRLSNVET----ILLQKEEREKGSQKKTDEALESIQKSILALTTTVTE 505
+K + + D LS VE L E++ + ++++TDE ++ + +L L +VTE
Sbjct: 491 MKDELEKKDHHLSTVEKESEEFLKISEKKLEDAKRETDEEIQMCARELLKLIDSVTE 547
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 KENKNT-EVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKN 636
K NK + +LES TL R+ + RL ++ +++NLKN
Sbjct: 1651 KANKQKWRKEIELESDEKTLSSRVRVLENRLNKLEVELENLKN 1693
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 KENKNT-EVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKN 636
K NK + +LES TL R+ + RL ++ +++NLKN
Sbjct: 935 KANKQKWRKEIELESDEKTLSSRVRVLENRLNKLEVELENLKN 977
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 KENKNT-EVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKN 636
K NK + +LES TL R+ + RL ++ +++NLKN
Sbjct: 872 KANKQKWRKEIELESDEKTLSSRVRVLENRLNKLEVELENLKN 914
>06_01_1188 + 10219546-10219664,10220855-10223660
Length = 974
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 266 EFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVET 397
EF+ + + + K LM L ++HR+ ++ + SR+++ +SN T
Sbjct: 86 EFKVHVESQSLAKQLMKLGERHRIAVQIRNLKSRIEE-VSNRNT 128
>04_04_0811 -
28246801-28247049,28247161-28247384,28248236-28248435,
28248612-28248888,28249035-28249104
Length = 339
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 251 QMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKG 430
Q E+H K E+ ++ +MAL ++ +MLE K I ++ VET +++ ++
Sbjct: 274 QQEKH----KQTAEEKQEAIMALTRRKQMLETEKETIQQIPAMDLKVETKQFREDVFKRR 329
Query: 431 SQKKTDEA 454
+ K D A
Sbjct: 330 YRAKKDLA 337
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 218 DLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVE- 394
DLS F NR + H LGE VKK+ L + + L+ + + +S +E
Sbjct: 719 DLSLF--QNRVEQNEHH----KLGELVKKLEQELQESKQELKAKQAQYEKSVSTVSELEK 772
Query: 395 TILLQKEEREKGSQKKTDEALESIQKSILALT 490
TI ERE G K + ++S++ + +++
Sbjct: 773 TIKTYGSERE-GRLKALERKIKSLKSELQSMS 803
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,733,581
Number of Sequences: 37544
Number of extensions: 323755
Number of successful extensions: 902
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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