Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20082
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 33 0.20
SB_28912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 33 0.26
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 33 0.26
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 33 0.35
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 32 0.46
SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_45951| Best HMM Match : DinI (HMM E-Value=2.2) 31 1.1
SB_28479| Best HMM Match : Exo_endo_phos (HMM E-Value=0.087) 31 1.1
SB_18159| Best HMM Match : DinI (HMM E-Value=2.2) 31 1.1
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4662| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_40282| Best HMM Match : Cwf_Cwc_15 (HMM E-Value=5.1) 31 1.1
SB_32894| Best HMM Match : DinI (HMM E-Value=2.2) 31 1.1
SB_28837| Best HMM Match : DinI (HMM E-Value=2.2) 31 1.1
SB_26985| Best HMM Match : DinI (HMM E-Value=2.2) 31 1.1
SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33) 31 1.1
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 31 1.4
SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11) 31 1.4
SB_54730| Best HMM Match : RdRP (HMM E-Value=0) 30 2.5
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 2.5
SB_58673| Best HMM Match : Vicilin_N (HMM E-Value=1.4) 29 3.2
SB_15801| Best HMM Match : eRF1_2 (HMM E-Value=4.8) 29 3.2
SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055) 29 4.3
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 4.3
SB_27517| Best HMM Match : TolA (HMM E-Value=0.25) 29 4.3
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 4.3
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14) 29 5.7
SB_26840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 5.7
SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011) 28 7.5
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 7.5
SB_44458| Best HMM Match : Filament (HMM E-Value=1) 28 9.9
SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 9.9
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 HEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLS-NVETILLQKEEREKGSQK 439
HE ++ L E ++ + +L+ LE L + LD+ L ++ET+ +E + +
Sbjct: 120 HESLDESLDESLETLDESLETLDESLETLDESLETLDESLDESLETLDESLDESLETLDE 179
Query: 440 KTDEALESIQKSILALTTTVTEN 508
DE+LE++ +S+ L ++ E+
Sbjct: 180 SLDESLETLDESLETLDESLDES 202
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +2
Query: 263 HEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKK 442
HE E L E ++K+L +L + + E L + LD+ L ++ L +E + +
Sbjct: 102 HESLET-LQESLEKLLESLHES--LDESLDESLETLDESLETLDESLETLDESLETLDES 158
Query: 443 TDEALESIQKSILALTTTVTEN 508
DE+LE++ +S+ T+ E+
Sbjct: 159 LDESLETLDESLDESLETLDES 180
>SB_28912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 182 GSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKH--RMLEPLKG 355
GS G P + D S A+ +ER R+ GE ++ A ++L+P
Sbjct: 136 GSSTPGLPSTSRDGPSNSANPSGSVERKRKRKSRWGETTERGSSAAKSPAPLKVLDPAAI 195
Query: 356 MISRLDQRLSNVETILLQKEE-REKGSQKKTDEALESIQKSILA 484
+R+ L+ +I + +EE E+ Q+K E ++S+ ILA
Sbjct: 196 EAARIAASLALEHSIGMSQEEINERERQRKEQEEIQSVYFRILA 239
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/58 (27%), Positives = 36/58 (62%)
Frame = +2
Query: 242 NRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKE 415
N++ +E+ E EK+LGE+ + ++ D++ R L+G + D +++ ++ +L +KE
Sbjct: 60 NQQYIEKVEQLEKLLGEKEEGIMALADERDR----LQGALQESDPKIAEIQGLLSEKE 113
>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
Length = 320
Score = 33.1 bits (72), Expect = 0.26
Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 RAHDIYTYTPRRILTPLNRYKNEQSAS*FN-LELKGRHAERNQTMVGRRRASIVDSSNRM 178
+A D + ++ + LN+ +E + S N L K +H + Q V + +++ ++++
Sbjct: 40 KAKDAKMHALQKRVDELNKTLDENTESWVNDLREKDKHNRQLQRSVDKLN-ELLEEADKL 98
Query: 179 PGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGM 358
++ A LS+ +Q+ E R + +VKK+ + K + ++ L+
Sbjct: 99 KDVVSQKDEKIAV-LSTNHDFKEKQLRETESRLEDFKNEVKKLQHTIKLKDKKIDGLESR 157
Query: 359 ISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVTENPRKI 520
+ L+ + + L KEE+ + + DE LES+ L+ ++ + +KI
Sbjct: 158 LEDLESANNKLHHSLKFKEEKISDLEGQIDE-LESLAAEKNRLSQSLEQKMKKI 210
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 32.7 bits (71), Expect = 0.35
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +2
Query: 164 SSNRMPGSYNR----GYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKH 331
+SN G Y R + DDL + G + E+ + RE+M Q+++ L D H
Sbjct: 3958 ASNEEIGEYRRRMGDNFCSTVDDLVASGQLYADEAEQLK-REQM---QIEEKLQR-DLAH 4012
Query: 332 RMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALES 463
R + + SRLD+R N + + E EK Q++ ALE+
Sbjct: 4013 RRDQQTSLLKSRLDERKRNKMRRMREAHEAEKAKQEQEMAALEA 4056
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/73 (27%), Positives = 42/73 (57%)
Frame = +2
Query: 245 RRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEERE 424
+ ++RHE + K L E +KK +DK+ ++ ++ + ++L++ E +L +K+
Sbjct: 129 KTNLQRHEEKAKSLNEMIKK---EIDKRQELVNEMQ----VVKKKLNDSERLLQEKDAEN 181
Query: 425 KGSQKKTDEALES 463
K +K+ D ALE+
Sbjct: 182 K--RKEMDAALEA 192
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 32.3 bits (70), Expect = 0.46
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Frame = +2
Query: 41 LTPLNRYKNEQSAS*FNLELKGRHAER-NQTMVGRR---RASIVDSSNRMPGSYNRGYPG 208
L LNR A N +LK RH++ N +G+ ++ ++ NR+ R
Sbjct: 237 LEDLNRMNEHLDAE--NKQLKARHSDSSNLNELGKSLKVKSEALEGLNRLNEHLEREVTN 294
Query: 209 CADDLSSFGASNRRQMERHEFREKM---------LGEQVKKMLMALDK-KHRMLEPLKGM 358
+ L++ G S++ Q ++ + E + L Q + +L L+ + + L +
Sbjct: 295 LRNQLAAKGDSSQSQYDQDQLYETVRQREMEVEELQMQNQNLLQRLEAVESETTDNLSDL 354
Query: 359 ISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSI 478
+SR ++ + + +Q EE+ + S D+ ES ++S+
Sbjct: 355 VSRKEKEIEELIATRVQLEEKLENSAHVHDQLEESHRRSM 394
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 215 DDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQ--RLSN 388
D++ +R Q +R+E L E++ +L D+ EP S +Q R N
Sbjct: 1135 DEIQDLLNEHREQQQRYENEITDLKEKLDTLLKEKDEVEAS-EPSDAFESLKNQLERYKN 1193
Query: 389 VETILLQKEEREKGSQKKTDEALESIQKS 475
+E +LLQ E + +++ + + I+++
Sbjct: 1194 IENLLLQSEAKNAETERTCEARITGIKEA 1222
>SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 206 GCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLS 385
G AD S A +++ + KML E +++ M LD+ R LE + ++ +
Sbjct: 142 GGADTYKSAVAKKNKELSEYLDELKMLQETNEELEMKLDESKRELEAATTEMDKIADEYT 201
Query: 386 NVETILLQKE 415
++TIL Q +
Sbjct: 202 KLKTILQQSD 211
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 31.5 bits (68), Expect = 0.80
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +2
Query: 152 SIVDSSNRMPGSYNRG-YPGCADDLSSFGAS-NRRQMERHEFR-EKMLGEQVKKMLMALD 322
S++ PGS + G + G D + G S N E+H + E +L E V + D
Sbjct: 887 SLLSEKPSSPGSSHVGNFQGICDKMDVDGPSHNMPHDEQHYHKQEAILDESVVVKIEVPD 946
Query: 323 KKHR-----MLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDE 451
++ ++ P GM++ +DQ + + L +E E G T+E
Sbjct: 947 EETAAEVAALINPEHGMLTLVDQGIESATVEKLDLQESEHGKGPSTEE 994
>SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +1
Query: 460 KYPEIYTSSNDDSHRES-----KENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQID 624
+Y ++ T ND + R + ++N NT + + N + R N + R + + D
Sbjct: 93 RYNDMNTRHNDMNMRHNDMNMRRDNMNTR-HNDMNMRHNDMNMRYNDMNTRHNDMNMRRD 151
Query: 625 NLKNTITEDNLRTLCQGMAYDENP*RNT*RRLRSY*INMN*SWLNTSTSNKN 780
N+ + N+R M Y++ R+ +R +NM+ + +NT ++ N
Sbjct: 152 NMNMRHNDMNMRHNDMNMRYNDMNTRHNDMNMRHNDMNMSYNGMNTRHNDMN 203
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/107 (21%), Positives = 47/107 (43%)
Frame = +1
Query: 460 KYPEIYTSSNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNT 639
+Y ++ T ND + R + N + + + + N + R + + R + + DN+
Sbjct: 170 RYNDMNTRHNDMNMRHNDMNMSY---NGMNTRHNDMNMRRDNMNTRHNDINMRRDNMNMR 226
Query: 640 ITEDNLRTLCQGMAYDENP*RNT*RRLRSY*INMN*SWLNTSTSNKN 780
+ N+R M Y++ R+ +R Y +NM + +N N N
Sbjct: 227 HNDMNMRHNDMNMRYNDMSMRHNDMNMRRYNMNMRHNDMNMRRDNMN 273
>SB_45951| Best HMM Match : DinI (HMM E-Value=2.2)
Length = 306
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 51 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 102
>SB_28479| Best HMM Match : Exo_endo_phos (HMM E-Value=0.087)
Length = 466
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 211 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 262
>SB_18159| Best HMM Match : DinI (HMM E-Value=2.2)
Length = 251
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 129 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 180
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 332 RMLEPLKGMISRLDQRLSNVETILLQKEEREK-GSQKKTDEALESIQKSILAL 487
+ LE KGM L++R ++ + + E+REK Q+K+D+ + +++K I+ L
Sbjct: 881 KQLEESKGMYLLLEKRYHLLKNKVKELEDREKISKQEKSDKLVVTLRKRIVDL 933
>SB_4662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 129 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 180
>SB_40282| Best HMM Match : Cwf_Cwc_15 (HMM E-Value=5.1)
Length = 228
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 371 DQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVTE-NPRKIKI 526
+QR SN +I+ EER S++ D SI+ + T +TE P+ +I
Sbjct: 100 EQRTSNYGSIMKSPEERSISSEESKDSGHASIENETVVPKTIITEPEPKPARI 152
>SB_32894| Best HMM Match : DinI (HMM E-Value=2.2)
Length = 211
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 51 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 102
>SB_28837| Best HMM Match : DinI (HMM E-Value=2.2)
Length = 281
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 51 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 102
>SB_26985| Best HMM Match : DinI (HMM E-Value=2.2)
Length = 246
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + +++L+N +TED
Sbjct: 124 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVESLENQLTED 175
>SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33)
Length = 567
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 371 DQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVTE-NPRKIKI 526
+QR SN +I+ EER S++ D SI+ + T +TE P+ +I
Sbjct: 92 EQRTSNYGSIMKSPEERSISSEESKDSGHASIENETVVPKTIITEPEPKPARI 144
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 245 RRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVET-ILLQKEER 421
++ E+ +E E+++K DK+ R + K +L++ E +L++KE+R
Sbjct: 890 KKDNEKARLKEMKDKEKIEKEKREKDKREREEKERKRRQQQLEKEKKEKEKKLLIEKEKR 949
Query: 422 EKGSQKKTDEALESIQK 472
EK QK+ E +K
Sbjct: 950 EKEKQKERLREKEEKEK 966
>SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11)
Length = 959
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 499 HRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQ-IDNLKNTITED 651
HR N + K G T+ ++LN +L +++ + ++ L+N +TED
Sbjct: 277 HRLIISKTNLHIQPKRRPQGQTVVKKLNVNKLKLPSIQEKLVERLENQLTED 328
>SB_54730| Best HMM Match : RdRP (HMM E-Value=0)
Length = 658
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +2
Query: 212 ADDLSSFGASNRRQMERHEF-REKMLGEQVKKMLMALDKKHRMLEPLK--GMI-SRLDQR 379
AD G R Q H+ +E +Q +M + + +H ++E L G+ SRL +
Sbjct: 275 ADSGVDHGYLTRLQESFHDMLKELRTSDQAAEMYLRIKGEHSLIELLHTYGLRNSRLQRA 334
Query: 380 LSNVETILLQKEEREKGSQ 436
LS + + L+K +++KG++
Sbjct: 335 LSGLRSRELRKMQKDKGTE 353
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +2
Query: 275 EKMLGEQVKKM---LMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKT 445
+K LGE ++M + +D K + ++ L+ + L+ LSN++ + + + ++KK
Sbjct: 2006 QKQLGELQRQMDAKIRQIDAKEQFIDELRSQNTGLEAELSNIKEEFTENKTGVETTEKKV 2065
Query: 446 ---DEALESIQKSILALTTTVTENPRK 517
+ ++ ++SI L T V R+
Sbjct: 2066 VSLESEIKDYKQSIYRLGTEVESLARE 2092
>SB_58673| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
Length = 218
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +2
Query: 257 ERHEFREKMLGEQ------VKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
E+ EFR+K+ GEQ K M L +H E K + ++ R + +E ++Q+ E
Sbjct: 81 EQEEFRQKLQGEQELLSAYQSKQAMQLKAQHEREE--KELQDKVSVRRALLEEKMMQETE 138
Query: 419 REKGSQKKTDEALESIQK 472
R + +++ L+S Q+
Sbjct: 139 RLREMREQKQAILQSRQE 156
>SB_15801| Best HMM Match : eRF1_2 (HMM E-Value=4.8)
Length = 562
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 119 RNQTMVGRRRASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQV 298
R Q ++ A++ D NR+ SYN ++D + + + E HEF LG+
Sbjct: 386 REQDVLSNEDAAL-DVLNRLQESYNTNCDNLSEDEELDRSEDVKDSEEHEF---SLGDAE 441
Query: 299 KKMLMALDKKHRML 340
K+ + A K + L
Sbjct: 442 KEFICATSKAYEEL 455
>SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055)
Length = 199
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 478 TSSNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTIT 645
++SN DS+ S N N++ DS S N+ + +++ ++ N +T+T
Sbjct: 92 SNSNSDSNSNSNSNSNSDSDSDSNSNSNSNSNSNSNSNSNSDSDSDSNSNSNSTVT 147
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +2
Query: 332 RMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVTENP 511
R L L+ +R+DQR+ +++ L + EE +G+ D L S Q +++ T+
Sbjct: 1466 RALAELEEERTRMDQRMQSIQKSLGESEEERRGA----DGRLSSAQTALMLQEETIRRLE 1521
Query: 512 RKIK 523
R+ K
Sbjct: 1522 RERK 1525
>SB_27517| Best HMM Match : TolA (HMM E-Value=0.25)
Length = 492
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 260 RHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQK 439
+ E +K + ++KK + DK+H + + G + R+ + + Q E E G ++
Sbjct: 135 KKEITKKSMHTKIKKKSIKADKQHSRIIKMTGRLERIKLGEEALRMEIAQ-EISELGLEE 193
Query: 440 KTDEALESIQK 472
K +E+ E +K
Sbjct: 194 KKEESAEEDRK 204
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 4.3
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Frame = +2
Query: 191 NRGYPGCADDLSSFGASNRRQMER----HEFREKMLGEQVKKMLMALDKKHRMLEP---- 346
NR C DDL +++ E HE REK+L + +K +K+ E
Sbjct: 1417 NRAIEDCKDDLERERRRAQKEKEDLIYDHEKREKVLQDGAEKDRKGFEKEKEEFEEAFRK 1476
Query: 347 ----LKGMISRLD----QRLSNVETIL---LQKEEREKGSQKKTDEALESIQKSI 478
+ +S+ D Q+L ++ T L ++KE+ E S+ +T+ E IQKS+
Sbjct: 1477 EKKIFQDELSKKDEDLAQKLQDLRTQLENEMEKEKAELQSRIETNIYGEEIQKSV 1531
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +1
Query: 493 DSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITEDNLRTL 666
++HR ++ T+ + +LE E + D+R++ + + +N I E + R +
Sbjct: 1083 ENHRHELDDLRTQAEKRLEELIQQHESEMEGVDSRIQQARLESENNFKEILETHQREM 1140
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 511 KENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITEDNLRTLCQ 672
KEN E+ ++ES + +LN D +E ++ +D +K + T Q
Sbjct: 1417 KENSEHELMQRIESTEQENQAKLNQKDKSIEELQASLDAVKKDFNDKLAETQSQ 1470
>SB_7787| Best HMM Match : FHA (HMM E-Value=6e-14)
Length = 379
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 559 NTLERRLNATDARLEAVKTQIDNLKNTITE 648
NTL+R +A D ++ +KT++D K + E
Sbjct: 212 NTLQRENSAKDGMIQQLKTEVDKQKKQLKE 241
>SB_26840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 502 RESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTITEDNLRT 663
R K KN ++ E G T E + +E I++LKN++ ++ LRT
Sbjct: 164 RRKKSRKNVSLE---EREGVTYESGVGLQRREVEITTLTIESLKNSVKDEELRT 214
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 248 RQMERHEFREKMLGEQVKKMLMALDKKHRM-LEPLKGMISRLDQRLSNVETILLQKEERE 424
+Q + E EK E+ KK L+KK R + L+ + +++ E I + EE++
Sbjct: 347 KQKKEQERLEKQ-AEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKK 405
Query: 425 KGSQKKTDEALESIQK 472
K +KK E E ++K
Sbjct: 406 KREEKKKQEEEEKMKK 421
>SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011)
Length = 633
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Frame = +2
Query: 155 IVDSSNRMPGSYNRGYPGCA-DDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKH 331
++D +M Y++ A DDL + Q+E ++ + QVK++ +D+K
Sbjct: 126 LLDEKKQMEEGYSKLKSASAMDDLQMKELQD--QLEAEQYFSTLYKTQVKELREEVDEKT 183
Query: 332 RMLEPLKGMISRLDQR---LSNVETILLQKEEREKGSQKKTDEALESIQKSILALTTTVT 502
+ + ++ + +L + LS + L K + E+ ++ +E ++K + V
Sbjct: 184 KQVTDIESKVKQLKEERESLSAQLELTLTKADSEQLARSIAEEQYSDLEKEKTMIELEVK 243
Query: 503 E 505
E
Sbjct: 244 E 244
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +2
Query: 242 NRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEER 421
N + +R F E LG+ ++ A+ K + + G+ R+ + S VET+ K +
Sbjct: 1025 NADKTQRILFLEAKLGDYEGEVDTAVRLKETAEDDVYGLRGRIVKLESQVETV--HKHKM 1082
Query: 422 EKGSQ-KKTDEALESIQKSILALTTTVTENPRKI 520
+ SQ ++ ++ L ++SI++L + V E RKI
Sbjct: 1083 QVTSQLEEANKKLVRSRESIMSLESQVVEG-RKI 1115
>SB_44458| Best HMM Match : Filament (HMM E-Value=1)
Length = 748
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 296 VKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKT 445
VK A D+K +++E L+G + R ++E QK R K Q +T
Sbjct: 553 VKDTSSAKDRKQKVIEELRGELRRAKNERVDLEKQREQKVRRAKTLQTQT 602
>SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 EIYTSSNDDSHR-ESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQIDNLKNTIT 645
E+ SSND + E N + KLE+ +T+ + + + ++TQ+ N K+ I
Sbjct: 283 ELLESSNDQKKKQEDTLNHRIQEIKKLENTVSTISAEVVKGNEIIHKLQTQLRNFKSEIK 342
Query: 646 EDNLRT 663
N+ T
Sbjct: 343 LKNVLT 348
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +2
Query: 248 RQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREK 427
++ME +++++ ++ + D+ HR + LK SRL Q +++ +L +++ R
Sbjct: 2090 KEMEEVLNQKRIVERKLAEEQSENDELHRQMAGLKKKSSRLAQEKEDMKLLLEEEQTRNT 2149
Query: 428 GSQKK 442
+KK
Sbjct: 2150 DLEKK 2154
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 260 RHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQK 439
R E +K ++VK+ ++ ++ LK + QRL +E ++EE+++
Sbjct: 649 REEEEKKKREDEVKREEEG--RRQKVEAELKLIEDEHKQRLEELEKKTKKEEEKKRSEHV 706
Query: 440 KTDEALESIQKSI 478
DE L+ +Q+ I
Sbjct: 707 NNDEELDRLQEEI 719
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,290,362
Number of Sequences: 59808
Number of extensions: 396477
Number of successful extensions: 1604
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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