Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20082
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.23
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.23
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.23
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 33 0.23
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 32 0.54
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 32 0.54
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 31 1.2
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 31 1.2
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 31 1.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 31 1.2
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 31 1.2
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 30 1.6
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 30 1.6
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 30 1.6
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 30 1.6
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 30 1.6
AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical... 30 1.6
Z81583-1|CAB04671.1| 234|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.9
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132949-4|CAB70101.2| 439|Caenorhabditis elegans Hypothetical ... 29 3.8
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.0
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 5.0
U41535-2|AAB63402.1| 731|Caenorhabditis elegans Hypothetical pr... 29 5.0
U41535-1|AAK67247.1| 734|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.6
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 28 6.6
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 6.6
AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever sho... 28 6.6
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 28 6.6
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 8.8
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 8.8
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 290 EQVKKMLM-ALDKKHRMLEPLKGMISRLD----QRLSNVETILLQKEEREKGSQKKTDEA 454
EQ K L ALD+ LE + + RL Q S +E + +KEE + ++K A
Sbjct: 1541 EQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRA 1600
Query: 455 LESIQKSI 478
LESIQ S+
Sbjct: 1601 LESIQASL 1608
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 290 EQVKKMLM-ALDKKHRMLEPLKGMISRLD----QRLSNVETILLQKEEREKGSQKKTDEA 454
EQ K L ALD+ LE + + RL Q S +E + +KEE + ++K A
Sbjct: 1541 EQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRA 1600
Query: 455 LESIQKSI 478
LESIQ S+
Sbjct: 1601 LESIQASL 1608
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 290 EQVKKMLM-ALDKKHRMLEPLKGMISRLD----QRLSNVETILLQKEEREKGSQKKTDEA 454
EQ K L ALD+ LE + + RL Q S +E + +KEE + ++K A
Sbjct: 1541 EQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRA 1600
Query: 455 LESIQKSI 478
LESIQ S+
Sbjct: 1601 LESIQASL 1608
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 290 EQVKKMLM-ALDKKHRMLEPLKGMISRLD----QRLSNVETILLQKEEREKGSQKKTDEA 454
EQ K L ALD+ LE + + RL Q S +E + +KEE + ++K A
Sbjct: 50 EQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRA 109
Query: 455 LESIQKSI 478
LESIQ S+
Sbjct: 110 LESIQASL 117
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.54
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +2
Query: 149 ASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKK 328
A +DS+ R S + D L G R E + K+ E+ +++ ALD+
Sbjct: 1505 AEYLDSTRRENKSLAQEVKDLTDQL---GEGGRSVAELQKIVRKLEVEK-EELQKALDEA 1560
Query: 329 HRMLEPLKGMISR----LDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALT 490
LE + + R + Q S +E + +KEE + +++ ALES+Q ++ A T
Sbjct: 1561 EAALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESMQATLEAET 1618
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.54
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +2
Query: 149 ASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKK 328
A +DS+ R S + D L G R E + K+ E+ +++ ALD+
Sbjct: 1505 AEYLDSTRRENKSLAQEVKDLTDQL---GEGGRSVAELQKIVRKLEVEK-EELQKALDEA 1560
Query: 329 HRMLEPLKGMISR----LDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSILALT 490
LE + + R + Q S +E + +KEE + +++ ALES+Q ++ A T
Sbjct: 1561 EAALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESMQATLEAET 1618
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +2
Query: 149 ASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKK 328
A +V+ R S ++ D L G S +M++ R ++ E+++ ALD+
Sbjct: 1501 AEVVEGLRRENKSLSQEIKDLTDQLGEGGRSVH-EMQKIIRRLEIEKEELQH---ALDEA 1556
Query: 329 HRMLEPLKGMISR----LDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSI 478
LE + + R + Q S +E + +KEE + ++K ALES+Q S+
Sbjct: 1557 EAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNHARALESMQASL 1610
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +2
Query: 245 RRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEERE 424
+R+ R+ K +++++M+MA +KH L L + + + E I+ Q ++RE
Sbjct: 145 QREQSRNNGEAKNECKRLREMIMAAKQKHEKLVELNSSCAMMQAKYD--EMIIRQDQDRE 202
Query: 425 -----KGSQKKTDEALESIQKSILAL 487
K + K ++E LE +++ + L
Sbjct: 203 ALEEGKLNLKASEEKLEQMREDCVTL 228
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +2
Query: 149 ASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKK 328
A +V+ R S ++ D L G S +M++ R ++ E+++ ALD+
Sbjct: 1501 AEVVEGLRRENKSLSQEIKDLTDQLGEGGRSVH-EMQKIIRRLEIEKEELQH---ALDEA 1556
Query: 329 HRMLEPLKGMISR----LDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSI 478
LE + + R + Q S +E + +KEE + ++K ALES+Q S+
Sbjct: 1557 EAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNHARALESMQASL 1610
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 437 KKTDEALESIQKSILALTTTVTENPRK 517
KK ++L+SI +I+A TTT TE P K
Sbjct: 148 KKMPKSLKSIYSTIVAKTTTTTEEPTK 174
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 437 KKTDEALESIQKSILALTTTVTENPRK 517
KK ++L+SI +I+A TTT TE P K
Sbjct: 148 KKMPKSLKSIYSTIVAKTTTTTEEPTK 174
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 437 KKTDEALESIQKSILALTTTVTENPRK 517
KK ++L+SI +I+A TTT TE P K
Sbjct: 148 KKMPKSLKSIYSTIVAKTTTTTEEPTK 174
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 437 KKTDEALESIQKSILALTTTVTENPRK 517
KK ++L+SI +I+A TTT TE P K
Sbjct: 148 KKMPKSLKSIYSTIVAKTTTTTEEPTK 174
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +2
Query: 149 ASIVDSSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKK 328
A +V+ R S ++ D L G S +M++ R ++ E+++ ALD+
Sbjct: 1504 AEVVEGLRRENKSLSQEIKDLTDQLGEGGRSVH-EMQKIIRRLEIEKEELQH---ALDEA 1559
Query: 329 HRMLEPLKGMISR----LDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSI 478
LE + + R + Q S +E + +KEE + ++K ALES+Q S+
Sbjct: 1560 EAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNHARALESMQASL 1613
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +2
Query: 245 RRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEERE 424
+R+ R+ K +++++M+MA +KH L L + + + E I+ Q ++RE
Sbjct: 145 QREQSRNNGEAKNECKRLREMIMAAKQKHEKLVELNSSCAMMQAKYD--EMIIRQDQDRE 202
Query: 425 -----KGSQKKTDEALESIQKSILAL 487
K + K ++E LE +++ + L
Sbjct: 203 ALEEGKLNLKASEEKLEQMREDCVTL 228
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
S + Q+++HE + + + + K H+ +E + ++ R + +E + ++
Sbjct: 1616 STKNQIKKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD 1675
Query: 419 REKGSQKKTDEALE 460
K +K+ +E LE
Sbjct: 1676 LSKERRKRLEETLE 1689
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
S + Q+++HE + + + + K H+ +E + ++ R + +E + ++
Sbjct: 1616 STKNQIKKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD 1675
Query: 419 REKGSQKKTDEALE 460
K +K+ +E LE
Sbjct: 1676 LSKERRKRLEETLE 1689
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
S + Q+++HE + + + + K H+ +E + ++ R + +E + ++
Sbjct: 1616 STKNQIKKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD 1675
Query: 419 REKGSQKKTDEALE 460
K +K+ +E LE
Sbjct: 1676 LSKERRKRLEETLE 1689
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
S + Q+++HE + + + + K H+ +E + ++ R + +E + ++
Sbjct: 1616 STKNQIKKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD 1675
Query: 419 REKGSQKKTDEALE 460
K +K+ +E LE
Sbjct: 1676 LSKERRKRLEETLE 1689
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +2
Query: 239 SNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEE 418
S + Q+++HE + + + + K H+ +E + ++ R + +E + ++
Sbjct: 1616 STKNQIKKHERLQSDIDKFADTIRALATKAHKFVEEKSPLTEQIQVRQAQIEKLYAGLQD 1675
Query: 419 REKGSQKKTDEALE 460
K +K+ +E LE
Sbjct: 1676 LSKERRKRLEETLE 1689
>AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical
protein H04M03.12 protein.
Length = 260
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 171 TECREVTIEDIRDVLMTLVHLVRATEDKWRDMSSER 278
TEC ++T+ I+ + L + R KWR +SSER
Sbjct: 71 TECNKITVISIKTLENHLKNDSRVRRVKWRHLSSER 106
>Z81583-1|CAB04671.1| 234|Caenorhabditis elegans Hypothetical
protein T02G6.1 protein.
Length = 234
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 739 YLFNSFSASVRCFFKDFRHRPFPDTMFEGYPQLLCFSSYLFEFSQL 602
++FN+F + FF +R++ FP T + + C + F F L
Sbjct: 22 HIFNAFWRKISDFFFGWRYKGFPKTNLQSLFSVFCSQNIYFYFEIL 67
>Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical
protein M195.4 protein.
Length = 142
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = +2
Query: 164 SSNRMPGSYNRGYPGCADDLSSFGASNRRQMERHEFRE-KMLGEQVKKMLMA---LDKKH 331
+ + PG N+ P + A + + F E KM E +KK +DK+
Sbjct: 36 NEEKKPGDENKN-PAAVGAEGAGAAEKPQDKSQKPFPEIKMPTESMKKKKNTDNEIDKRK 94
Query: 332 RMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQKSI 478
+M S D L +E++ +++ ++ K SQKK LE+ +K +
Sbjct: 95 KMKTGFYQEKSDEDDTLEKIESLKVEQSDKTKKSQKK-KLTLENGEKKV 142
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 430 FSKEDR*STGKYPEIYTSSNDDSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAV 609
FS + + + + Y ++D+S E +E + E D+ +E GNT+E ++ D L+ V
Sbjct: 121 FSGKTKTEAKRTQQDYYPTDDESSSEEEEEEE-EGDNDIEDAGNTVEVKIEPID--LDDV 177
Query: 610 KTQIDNLKNT 639
ID T
Sbjct: 178 DEAIDGNPET 187
>AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical
protein F42G2.6 protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 242 NRRQMERHEFREKMLGEQVKKMLMALDKKHRML---EPLKGMISRLDQRLSNVET-ILLQ 409
NRR HE + E +K++L L+ K E ++G + + V + +L++
Sbjct: 495 NRRSYAGHELTAMEM-EALKQLLNLLNGKEMPTGKKEEVEGSGLTISEAHGTVGSPMLIE 553
Query: 410 KEEREKGS-QKKTDEALESIQKSILALTTTVTENPRKIKIQK 532
K+E +GS + + A E I +++ TTT E +K+++ K
Sbjct: 554 KKEELEGSLEHQPTMANEEIDQNLKEETTTKPEYRKKLRMSK 595
>AL132949-4|CAB70101.2| 439|Caenorhabditis elegans Hypothetical
protein Y53F4B.4b protein.
Length = 439
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 332 RMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALESIQ 469
R + LK +ISR QR+ VE +Q E R + K+ D+ ++ IQ
Sbjct: 93 RCSQELKSVISRRIQRIKEVEH-AMQDEGRGIKAMKEADDGMKKIQ 137
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/83 (22%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +2
Query: 284 LGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALE- 460
L +++ + ALD++ R + + + + D+R+ V+ ++ ++ + +Q D E
Sbjct: 743 LETRIRDLETALDEETRRHKETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEK 802
Query: 461 -SIQKSILALTTTVT-ENPRKIK 523
+IQK LA + +VT +N ++++
Sbjct: 803 LNIQKRQLAESESVTMQNLQRVR 825
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 457 GKYPEIYTSSND-DSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQI 621
G+ E+ T+ + D+ R EN+ ++L++ +ERRL + +EA++ +
Sbjct: 462 GEIRELQTALKEADAQRRDAENRAQRALAELQALRIEMERRLQEKEEEMEALRKNL 517
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/83 (22%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +2
Query: 284 LGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALE- 460
L +++ + ALD++ R + + + + D+R+ V+ ++ ++ + +Q D E
Sbjct: 743 LETRIRDLETALDEETRRHKETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEK 802
Query: 461 -SIQKSILALTTTVT-ENPRKIK 523
+IQK LA + +VT +N ++++
Sbjct: 803 LNIQKRQLAESESVTMQNLQRVR 825
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 457 GKYPEIYTSSND-DSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQI 621
G+ E+ T+ + D+ R EN+ ++L++ +ERRL + +EA++ +
Sbjct: 462 GEIRELQTALKEADAQRRDAENRAQRALAELQALRIEMERRLQEKEEEMEALRKNL 517
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin protein.
Length = 882
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/83 (22%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +2
Query: 284 LGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGSQKKTDEALE- 460
L +++ + ALD++ R + + + + D+R+ V+ ++ ++ + +Q D E
Sbjct: 759 LETRIRDLETALDEETRRHKETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEK 818
Query: 461 -SIQKSILALTTTVT-ENPRKIK 523
+IQK LA + +VT +N ++++
Sbjct: 819 LNIQKRQLAESESVTMQNLQRVR 841
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 457 GKYPEIYTSSND-DSHRESKENKNTEVDSKLESYGNTLERRLNATDARLEAVKTQI 621
G+ E+ T+ + D+ R EN+ ++L++ +ERRL + +EA++ +
Sbjct: 478 GEIRELQTALKEADAQRRDAENRAQRALAELQALRIEMERRLQEKEEEMEALRKNL 533
>U41535-2|AAB63402.1| 731|Caenorhabditis elegans Hypothetical
protein F18A1.6a protein.
Length = 731
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 MERHEFREKMLGEQVKKMLMAL--DKKHRMLEPLKGMISRLDQRLSNVETILLQKEER 421
++RH + E+M+G+ V KM +L + +L + +SRL LS +E L ER
Sbjct: 415 LDRHSWFERMVGDSVPKMKASLFSEDSDDVLVRVTSELSRLLSLLSALERFPLVSLER 472
>U41535-1|AAK67247.1| 734|Caenorhabditis elegans Hypothetical
protein F18A1.6b protein.
Length = 734
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 MERHEFREKMLGEQVKKMLMAL--DKKHRMLEPLKGMISRLDQRLSNVETILLQKEER 421
++RH + E+M+G+ V KM +L + +L + +SRL LS +E L ER
Sbjct: 418 LDRHSWFERMVGDSVPKMKASLFSEDSDDVLVRVTSELSRLLSLLSALERFPLVSLER 475
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 245 CCSHQMN*GHQHIPD--ILDCN 186
CCSH+ GH H+P +DC+
Sbjct: 337 CCSHECTRGHNHVPMRLCMDCS 358
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 245 CCSHQMN*GHQHIPD--ILDCN 186
CCSH+ GH H+P +DC+
Sbjct: 337 CCSHECTRGHNHVPMRLCMDCS 358
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 493 DSHRESKENKNTEVDSKLE--SYGNTLERRLNATDARLEAVKTQIDNLKNTITE 648
+ + ++KE+ + ++ LE LE+RL A L+ +T+ID T+ E
Sbjct: 18 EKYEQAKEDIHKAANAGLELLRQKEDLEKRLAEMQAELDLARTEIDKTNQTLAE 71
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 245 CCSHQMN*GHQHIPD--ILDCN 186
CCSH+ GH H+P +DC+
Sbjct: 330 CCSHECTRGHNHVPMRLCMDCS 351
>AF078789-2|AAK21516.1| 318|Caenorhabditis elegans Hypothetical
protein Y44E3B.1a protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 371 DQRLSNVETILLQKEEREKGSQKKTDEALESIQKS 475
DQ+L ++ ++ +KE KG +K + ALES KS
Sbjct: 284 DQQL--IKQLIREKESTSKGPRKSSRNALESFNKS 316
>AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform b protein.
Length = 461
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 50 LNRYKNEQSAS*FNLELKGRHAERNQTMVGRRRASIVDSSNRMPGSYNRGYPGCADDLSS 229
+ + + E+ +L+ A+ Q RR + +NR G +R +P +D SS
Sbjct: 272 MQKEQEEEEERRMEQKLQEAAAQEAQKAASPRRNN--RRNNRRGGGNSRYHPDESDRESS 329
Query: 230 FGASNRRQMERHEFREKM 283
FG S + E E E++
Sbjct: 330 FGGSIAEEKEEEEAEEEL 347
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 50 LNRYKNEQSAS*FNLELKGRHAERNQTMVGRRRASIVDSSNRMPGSYNRGYPGCADDLSS 229
+ + + E+ +L+ A+ Q RR + +NR G +R +P +D SS
Sbjct: 272 MQKEQEEEEERRMEQKLQEAAAQEAQKAASPRRNN--RRNNRRGGGNSRYHPDESDRESS 329
Query: 230 FGASNRRQMERHEFREKM 283
FG S + E E E++
Sbjct: 330 FGGSIAEEKEEEEAEEEL 347
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = +2
Query: 254 MERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNVETILLQKEEREKGS 433
+E ++ ++ E+++++ AL + + +E L+ R + ++ EE+ + S
Sbjct: 43 VEENDRKDNENSERIRQLDEALKESQKRVEQLEAACFRYKNQAKGEFASSIKSEEKLEKS 102
Query: 434 QKKTDE 451
Q+K DE
Sbjct: 103 QRKDDE 108
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 218 DLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNV-E 394
+LSS + NR E ++ +KK+ L K ++ L+ I + Q ++ + E
Sbjct: 546 ELSSKESENRSSEELEVDELQLSNATIKKLNADLSTKAGLIRSLEDSIEKKSQMITRLEE 605
Query: 395 TILLQKEEREKGSQKKTDEALESIQ-KSILALTTTVTENPRK 517
+L E ++ LE+IQ + I TT+ + K
Sbjct: 606 QAVLDSSELSSTKRQLEHSRLEAIQWRKISDETTSAMQTQLK 647
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +2
Query: 218 DLSSFGASNRRQMERHEFREKMLGEQVKKMLMALDKKHRMLEPLKGMISRLDQRLSNV-E 394
+LSS + NR E ++ +KK+ L K ++ L+ I + Q ++ + E
Sbjct: 546 ELSSKESENRSSEELEVDELQLSNATIKKLNADLSTKAGLIRSLEDSIEKKSQMITRLEE 605
Query: 395 TILLQKEEREKGSQKKTDEALESIQ-KSILALTTTVTENPRK 517
+L E ++ LE+IQ + I TT+ + K
Sbjct: 606 QAVLDSSELSSTKRQLEHSRLEAIQWRKISDETTSAMQTQLK 647
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,975,770
Number of Sequences: 27780
Number of extensions: 307008
Number of successful extensions: 1167
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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