Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20078
(770 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11) 64 9e-11
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 50 2e-06
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 43 2e-04
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 42 6e-04
SB_39543| Best HMM Match : efhand (HMM E-Value=0.00063) 42 7e-04
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 41 0.001
SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_43931| Best HMM Match : efhand (HMM E-Value=0.17) 37 0.021
SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12) 36 0.027
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_10626| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05) 33 0.25
SB_16004| Best HMM Match : efhand (HMM E-Value=1.7) 33 0.34
SB_58602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09) 31 0.78
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 31 1.0
SB_1308| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 31 1.0
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 31 1.4
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35) 29 3.1
SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 28 9.6
>SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11)
Length = 205
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +1
Query: 514 LAHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAIL 651
LAHFRP + N LN REEKL+FAF +YD+DSDG IS+ +L+AIL
Sbjct: 110 LAHFRPFHGHSPNPLNTREEKLKFAFRIYDIDSDGYISKTDLIAIL 155
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 251 KVGNKSSLLLREEEIAQIQEETG 319
K+G KSS LL+EE++A+IQ ETG
Sbjct: 57 KMGLKSSSLLQEEDLAEIQRETG 79
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/60 (40%), Positives = 41/60 (68%)
Frame = +2
Query: 329 NQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFM 508
++I RL RF LD ++ G+LS E+F+ +PEL NPL +R++ F A+ + + V+F +F+
Sbjct: 39 DEIRRLGKRFRKLDLDNSGSLSVEEFMSLPELQQNPLVQRVITIFDADGNGE-VDFKEFI 97
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 565 REEKLRFAFSMYDLDSDGKISRDELLAIL 651
+E KL+FAF +YD+D+DG IS EL +L
Sbjct: 109 KESKLKFAFRIYDMDNDGYISNGELFQVL 137
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
EEKL++AFSMYDLD +G ISR E+L I+
Sbjct: 98 EEKLKWAFSMYDLDGNGYISRQEMLEIV 125
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KL++AFSMYDLD +G ISR E+L I+
Sbjct: 98 EQKLKWAFSMYDLDGNGYISRQEMLEIV 125
>SB_39543| Best HMM Match : efhand (HMM E-Value=0.00063)
Length = 54
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KL++AFSMYDLD +G ISR E+L I+
Sbjct: 26 EQKLKWAFSMYDLDGNGYISRGEMLEIV 53
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KL++AF+MYDLD +G ISR E+L I+
Sbjct: 98 EQKLKWAFNMYDLDGNGYISRQEMLEIV 125
>SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
+EKL++AF +YDLD DG I++ E+L I+
Sbjct: 89 DEKLQWAFKLYDLDGDGCITKQEMLHIV 116
>SB_43931| Best HMM Match : efhand (HMM E-Value=0.17)
Length = 204
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/22 (63%), Positives = 21/22 (95%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRD 633
+EKL++AF++YDLDSDG I+R+
Sbjct: 159 DEKLKWAFNLYDLDSDGVITRE 180
>SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)
Length = 146
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
+EKL +AF +YD+++DG ISR E++ I+
Sbjct: 97 DEKLEWAFRIYDINNDGSISRMEMIEII 124
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 565 REEKLRFAFSMYDLDSDGKISRDELLAIL 651
+E KLR+AF +YD D G++S+ E+L I+
Sbjct: 100 KETKLRWAFEIYDSDGSGEVSKKEMLEIV 128
>SB_10626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KLR+AFS+YD++ DG I++ E+ I+
Sbjct: 2 EQKLRWAFSIYDVNGDGFITKQEMFRIV 29
>SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05)
Length = 611
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 571 EKLRFAFSMYDLDSDGKISRDELLAIL 651
+K R F ++DLD D +S+DEL A+L
Sbjct: 180 DKCRVLFKVFDLDEDDGVSKDELTAVL 206
>SB_16004| Best HMM Match : efhand (HMM E-Value=1.7)
Length = 201
Score = 32.7 bits (71), Expect = 0.34
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Frame = +2
Query: 254 VGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSL-------DKNDCGT---LSRED 403
+GNK EE++ Q+ T FT I R++ R+ +L D + T L
Sbjct: 1 MGNKVCAFT-EEQLEDYQDCTFFTRADILRIHKRYRALHPVLIPDDYKELETQPLLKMRH 59
Query: 404 FLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMGFLHTLGPS 535
L++PEL NP RI Q F+ + + F F+ + L S
Sbjct: 60 LLKLPELKENPFKCRICQ-VFSVNGSGALTFDDFLNMMSVLSDS 102
>SB_58602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 227 QRLVVISQKVGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDF 406
Q+ +I K+G S L E++I + Q E T NQ+ RL R K + G L +
Sbjct: 177 QQARLIQLKLGQDSRLTELEQDIERKQRELVETNNQVHRLEERIWKRKKREEGIL---EG 233
Query: 407 LRIPEL 424
L IP++
Sbjct: 234 LEIPKI 239
>SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09)
Length = 231
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 529 PIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDEL 639
P K + +NC E + AF MYD + DG+IS +EL
Sbjct: 151 PPIKIKGRSVNCDGE-IEAAFKMYDTNGDGQISAEEL 186
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 571 EKLRFAFSMYDLDSDGKISRDEL 639
E+ +F F ++D D DG +SRDEL
Sbjct: 77 ERQQFCFRVFDCDQDGFLSRDEL 99
>SB_1308| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
Length = 352
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 315 VSSCICAISSSLNNKDDLFPTFCEITTNLCAKTFD 211
+++ +CA+ + LNNK ++ T T NLC + FD
Sbjct: 150 ITAVLCAMPAFLNNKVVIYNTNTGRTLNLCVEEFD 184
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 556 LNCREEKLRFAFSMYDLDSDGKISRDE 636
L EEKL F+ DLD DGKIS ++
Sbjct: 41 LRLSEEKLAITFNELDLDGDGKISLED 67
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +2
Query: 356 FTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMGFLHTLGPS 535
+ D N GT+SR++ R+ E P+S+ + + + + F FL+ LG
Sbjct: 547 YMKADDNRDGTISRDELRRLLEKYCLPVSDEHFEMLWGHCDVNSDGHVDFQEFLNNLGVD 606
Query: 536 RRIGKINSIAEK 571
G N ++ +
Sbjct: 607 IVSGDFNGLSTR 618
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 293 IAQIQEETGFTPNQIERLYSRFTSLDKNDCGT-LSREDFLRIPELAINPLSERIV 454
+A +QEETG T N ++ + S ++ T L+ L++P+ + L E+IV
Sbjct: 27 LATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLKLPDKKLIDLYEQIV 81
>SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35)
Length = 552
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 553 KLNCREEKLRFAFSMYDLDSDGKISRDELL 642
K++ EE+ +S YD D GKIS +E L
Sbjct: 518 KIDLNEEEFFHVYSFYDKDMTGKISYNEFL 547
>SB_56183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 577 LRFAFSMYDLDSDGKISRDEL 639
LR AF YD D GKI DEL
Sbjct: 327 LRAAFEHYDKDKSGKICLDEL 347
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 574 KLRFAFSMYDLDSDGKISRDELLAIL 651
++R FSM+D D+ G I DEL ++
Sbjct: 4 EMRDVFSMFDKDNSGSIDTDELRDVM 29
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,411,847
Number of Sequences: 59808
Number of extensions: 485328
Number of successful extensions: 1167
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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