Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20078
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 107 1e-23
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 77 2e-14
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 49 3e-06
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 40 0.002
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 40 0.002
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 37 0.014
Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 34 0.098
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 34 0.098
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 34 0.098
Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical pr... 32 0.52
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.69
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical pr... 30 1.6
U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF039045-11|AAB94202.1| 259|Caenorhabditis elegans Hypothetical... 29 2.8
Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical pr... 29 3.7
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 29 4.8
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 6.4
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 28 6.4
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 28 6.4
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 28 6.4
AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear horm... 28 6.4
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 28 6.4
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 28 6.4
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 28 8.5
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 28 8.5
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 107 bits (256), Expect = 1e-23
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Frame = +2
Query: 254 VGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAIN 433
+GN SSL+LR+EEI +I ET F NQI RLYSRF SLDK G LSR+DFL +PELA+N
Sbjct: 1 MGNSSSLMLRDEEIEEIMSETEFNRNQIVRLYSRFLSLDKKGQGFLSRDDFLNVPELAVN 60
Query: 434 PLSERIVQSFF------AESHDDRVNFLQFMGFLHTLGPSRRIGKINSIAEKKN 577
PL +RIV +FF ++ + ++NF QF+ L P R+ K N++ +K+
Sbjct: 61 PLGDRIVDAFFTLASSNGDNEEQQLNFRQFVRILAHFQPISRVKK-NALNSRKD 113
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/47 (51%), Positives = 35/47 (74%)
Frame = +1
Query: 511 VLAHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAIL 651
+LAHF+PI + ++N LN R++KL FAF MYDL+ + I+R+E IL
Sbjct: 93 ILAHFQPISRVKKNALNSRKDKLLFAFKMYDLNKNDYITREEFKVIL 139
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 660 MVGANISEEQLTSIAERT 713
MVGANI+ +QL IA+RT
Sbjct: 142 MVGANITSDQLDKIADRT 159
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 24/132 (18%)
Frame = +2
Query: 254 VGNKSSLLLREEEIAQIQEETG----------FTP--------NQIERLYSRFTSLDKND 379
+GN +S +L + E+ +I +ET FTP +QI RLY+RF SLDKN
Sbjct: 1 MGNSNSSILSDAEMREIMDETQCKVCVIIAKQFTPKNTISVNKHQILRLYTRFASLDKNG 60
Query: 380 CGTLSREDFLRIPELAINPLSERIVQSFF------AESHDDRVNFLQFMGFLHTLGPSRR 541
G LSR+DFL +PELA+NPL +RI+ +FF +S ++ F QF+ L P +
Sbjct: 61 QGYLSRDDFLNVPELAVNPLGDRIIDAFFTLGDSDGDSKSGQLTFRQFVRILAHFQPISK 120
Query: 542 IGKINSIAEKKN 577
+ K N++ +K+
Sbjct: 121 V-KDNALNSRKD 131
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +1
Query: 511 VLAHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAIL 651
+LAHF+PI K ++N LN R++KLRFAF MYDL+ + I+R+E IL
Sbjct: 111 ILAHFQPISKVKDNALNSRKDKLRFAFKMYDLNKNNYITREEFKVIL 157
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +1
Query: 511 VLAHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAILA 654
VL+HFRPI KN+ + N RE KLRFAF+MYDL+ G I++DE ILA
Sbjct: 94 VLSHFRPINKNKPHPWNSREAKLRFAFTMYDLNKSGTITKDEFQDILA 141
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +2
Query: 263 KSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGT-----LSREDFLRIPELA 427
++S + E E+ + E+G + I +LY RF SL + T L++ DF I EL
Sbjct: 3 QNSSQIPEHELEHLSIESGLSRGGILKLYGRFISLATHRDKTTNEYFLTKGDFQSIAELK 62
Query: 428 INPLSERIVQSFFAESHDDRVNFLQFMGFLHTLGPSRRIGK 550
NPL +RI+ +FFA++ + F F+ L R I K
Sbjct: 63 QNPLGDRIIDAFFADAEVLERRKVYFKDFVKVLSHFRPINK 103
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +2
Query: 314 TGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVN 493
+ F ++ RL RF LD + G+LS E+F+ +PEL NPL +R++ F E + V+
Sbjct: 13 SNFDAYELRRLTRRFKKLDVDGSGSLSVEEFMSLPELQQNPLVQRVI-DIFDEDGNGEVD 71
Query: 494 FLQFM 508
F +F+
Sbjct: 72 FREFI 76
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 565 REEKLRFAFSMYDLDSDGKISRDELLAIL 651
+ KL+FAF +YD+D DG IS EL +L
Sbjct: 88 KNTKLKFAFRIYDMDRDGFISNGELFQVL 116
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +2
Query: 314 TGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVN 493
+ F ++ RL RF LD + G+LS E+F+ +PEL NPL +R++ F E + V+
Sbjct: 13 SNFDAYELRRLTRRFKKLDVDGSGSLSVEEFMSLPELQQNPLVQRVI-DIFDEDGNGEVD 71
Query: 494 FLQFM 508
F +F+
Sbjct: 72 FREFI 76
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 565 REEKLRFAFSMYDLDSDGKISRDELLAIL 651
+ KL+FAF +YD+D DG IS EL +L
Sbjct: 88 KNTKLKFAFRIYDMDRDGFISNGELFQVL 116
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
+EKL +AF +YDLD DG I+R+E+L+I+
Sbjct: 98 DEKLHWAFKLYDLDQDGFITRNEMLSIV 125
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
+EKL +AF +YDLD DG I+R+E+L+I+
Sbjct: 98 DEKLHWAFKLYDLDQDGFITRNEMLSIV 125
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
+EKL +AFS+YD+D DG I++DE+ I+
Sbjct: 108 DEKLDWAFSLYDVDKDGFITKDEMADIV 135
>Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical
protein F30A10.1 protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.042
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Frame = +2
Query: 287 EEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGT-----------LSREDFLRIPELAIN 433
E++ + Q+ T FT I RLY RF +L+ + T L+ E+ ++PEL N
Sbjct: 133 EQLDEYQDCTFFTRKDIIRLYKRFYALNPHKVPTNMQGNRPAITTLTFEEVEKMPELKEN 192
Query: 434 PLSERIVQSFFAESHDDRVNFLQFMGFL 517
P RI + F S D R N L F FL
Sbjct: 193 PFKRRICEVF---SEDGRGN-LSFDDFL 216
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KL +AF MYD+D +G I E++ I+
Sbjct: 100 EQKLEWAFRMYDIDGNGTIDEKEMIKII 127
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 535 KKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAIL 651
KKN+ RE+ L+ F +DL+ DG I R+EL A++
Sbjct: 9 KKNQGEVGEIREDDLKGIFREFDLNGDGYIQREELRAVM 47
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E+KL +AF MYD+D +G I E++ I+
Sbjct: 100 EQKLEWAFRMYDIDGNGTIDEKEMIKII 127
>Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical
protein T04F3.4 protein.
Length = 127
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 532 IKKNRENKLNCR---EEKLRFA-FSMYDLDSDGKISRDELLAILAH 657
IK++ ENK+ EE+ RF FSM+DL+ D I E+L L H
Sbjct: 35 IKQHLENKIEVEKLTEEQQRFHYFSMHDLNKDNFIDGIEILKALTH 80
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +2
Query: 242 ISQKVGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLR-IP 418
+++K+ K + E I + + ++E+++ F +D + GT+S + + +
Sbjct: 18 VAKKLIKKHKCKAKCENIDDLANRYEVSKQEVEKVFKIFQLMDDDGSGTISSSEVAKMLN 77
Query: 419 ELAINPLSERIVQSFFAESH---DDRVNFLQFM 508
EL I+ +S ++VQ+ S D +++F +F+
Sbjct: 78 ELGID-VSPKVVQAVMRSSDVSGDGQIDFEEFL 109
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 571 EKLRFAFSMYDLDSDGKISRDELLAILAHGWLEPILVRNS*RVLLNE 711
++LR F M+D D DG I + E+L+I+ L+ R L NE
Sbjct: 202 DQLREQFDMFDKDKDGFIEKMEMLSIVRELSLQASFPRQVVEQLFNE 248
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +1
Query: 559 NCRE--EKLRFAFSMYDLDSDGKISRDEL 639
NC+ E+ + AF+ +D ++DG+I+ DEL
Sbjct: 122 NCKNKIEEYKRAFNFFDANNDGRITIDEL 150
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 574 KLRFAFSMYDLDSDGKISRDELLAILAHGWLEPILV 681
+L F + D+D DG++SR+E+ A+L +EP V
Sbjct: 23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRV 58
>Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical
protein F55A11.1 protein.
Length = 186
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 559 NCREEKLRFA-FSMYDLDSDGKISRDELLAILAH 657
N E+L+F F+M+DLD +GK+ EL+ + H
Sbjct: 74 NMTPEQLQFHYFNMHDLDKNGKLDGVELIKAITH 107
>U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical
protein T03F1.11 protein.
Length = 81
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E +LR FS++D D G IS+D+++ +L
Sbjct: 5 EHELREMFSLHDKDMSGFISKDDVICML 32
>AF039045-11|AAB94202.1| 259|Caenorhabditis elegans Hypothetical
protein F15E11.5 protein.
Length = 259
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = -3
Query: 669 LQPSMCQYSEEFISGYFTITVQIIHRKCKPQFFFSAIEFIFPILLDGPKVCKNPMNCRKL 490
L+P C E FISGY + ++ +C+PQ F L P NC +
Sbjct: 11 LKPRFC---ELFISGYGDFAEKFLNERCEPQCVF------LEAFLTSENADLFPTNCSTV 61
Query: 489 TLSSWLSAKNDCTILSLSGLIAN 421
ND T +L+ L N
Sbjct: 62 CADIQFPYNNDLTEENLTVLFQN 84
>Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical
protein C56A3.6 protein.
Length = 458
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 580 RFAFSMYDLDSDGKISRDELLAI 648
R AF M+D D +G I RDE + I
Sbjct: 172 RIAFLMFDEDDNGNIDRDEFMLI 194
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 242 ISQKVGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSRED 403
I +GN SSL +E E T + + +SR S+DK++C + + D
Sbjct: 431 ILNALGNLSSLKSAVKEYRGSDEFTNAASSSVSGYHSRVRSMDKSNCYFVIKND 484
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 209 LSKVLAQRLVVISQKVGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGT 388
L + +AQ IS K K S L E+ IAQ++ + +QIE+L+ R + + GT
Sbjct: 710 LKQEIAQLNEKISTKETEKDSEL--EKTIAQLEIDNSSKSDQIEKLHLRVNDM-LDQMGT 766
Query: 389 LSREDFLRIPEL-AINPLSERIVQSFFAES 475
+ E + E+ I+ + ++++S ES
Sbjct: 767 IKDELVKKNEEIKTISAKTAQLLESNTVES 796
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 568 EEKLRFAFSMYDLDSDGKISRDELLAIL 651
E +LR F+++D + DG IS D+L+ ++
Sbjct: 79 ERELRDVFNVFDKNGDGVISIDDLIFVM 106
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 586 AFSMYDLDSDGKISRDELLAILAHGWLEPI 675
AF+M+D GKI D+L+ IL + EP+
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPL 130
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 586 AFSMYDLDSDGKISRDELLAILAHGWLEPI 675
AF+M+D GKI D+L+ IL + EP+
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPL 130
>AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical
protein M57.1 protein.
Length = 665
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 517 AHFRPIKKNRENKLNCREEKLRFAFSMYDLDSDGKISRDELLAILAHGWLE 669
+HF P K N NK + EE++R +++ GK+ D L I AHG +E
Sbjct: 51 SHFAP-KMNEFNKYSI-EERIRLMYALR-----GKVEDDFLTRIQAHGTVE 94
>AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 96 protein.
Length = 402
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 221 LAQRLVVISQKVGNKSSLLLREEEIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSRE 400
+A+++ + +KSS E+ + + F P I++ +R T + KN+ + +
Sbjct: 137 VARKIFEKDATISHKSSNYYNSLELLTLALDA-FRPKDIDKKLTRLTKIGKNESLLMWEQ 195
Query: 401 DFLRIPE 421
FLR E
Sbjct: 196 SFLRAAE 202
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 586 AFSMYDLDSDGKISRDELLAILAHGWLEPI 675
AF+M+D GKI D+L+ IL + EP+
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPL 130
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 586 AFSMYDLDSDGKISRDELLAILAHGWLEPI 675
AF+M+D GKI D+L+ IL + EP+
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPL 130
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 323 TPNQIERLYSRFTSLDKNDCGTLSREDF-LRIPELAINPLSERIVQ 457
TP +I+ F DK+ GT+S ++ + + L NP + I++
Sbjct: 76 TPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILE 121
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 323 TPNQIERLYSRFTSLDKNDCGTLSREDF-LRIPELAINPLSERIVQ 457
TP +I+ F DK+ GT+S ++ + + L NP + I++
Sbjct: 19 TPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILE 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,013,643
Number of Sequences: 27780
Number of extensions: 395446
Number of successful extensions: 1034
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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