Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20077
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   2.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.4  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 368 PWYQPSFTEVRKVLQLFRLRQINNG 442
           P  QP+    R   +  R++Q+NNG
Sbjct: 80  PQQQPASVARRNARERNRVKQVNNG 104


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 199 RRSSAIKKKREIFKRAEQ*SRNTA 270
           R S   KK+RE+ + A+Q + N A
Sbjct: 298 RFSDESKKRRELLRLAQQVNANIA 321


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 101 KTVRSCLLYQSQCSSIVRGERLFALG 178
           K V  C L +S   + + G R  ALG
Sbjct: 496 KVVAECTLKESAAINQILGRRWHALG 521


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 101 KTVRSCLLYQSQCSSIVRGERLFALG 178
           K V  C L +S   + + G R  ALG
Sbjct: 388 KVVAECTLKESAAINQILGRRWHALG 413


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 298 PDKHAIVATTTFPGKP 345
           P KH +   T  PG+P
Sbjct: 267 PSKHGLNDATAAPGEP 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,137
Number of Sequences: 336
Number of extensions: 1913
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)