Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20077
(506 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 73 2e-13
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 73 2e-13
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 73 2e-13
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 42 6e-04
AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-P... 28 8.3
AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-P... 28 8.3
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +2
Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYI 502
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYI 130
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
K+A ++ NL EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 28 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87
Query: 375 INQVSPK 395
IN+V+PK
Sbjct: 88 INKVAPK 94
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +2
Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYI 502
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYI 143
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
K+A ++ NL EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 375 INQVSPK 395
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 85 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQ 252
PV K +KKLPAVPES LK + LK+ + +K+E RAE+
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEK 59
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +2
Query: 392 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYI 502
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYI 143
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 195 KEAFFCHQEEEGNLQEG*TVVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 374
K+A ++ NL EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 375 INQVSPK 395
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 85 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQ 252
PV K +KKLPAVPES LK + LK+ + +K+E RAE+
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEK 59
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2
Query: 502 NVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 389
+V LGD H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 54 DVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 386 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFL 258
+LVDT D+DDK QFG G+V + + + D F LD + L
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLIL 136
>AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-PB,
isoform B protein.
Length = 1089
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 462 LFRRTNTPLFIWRSLNSCRTLRTSVKLG*YHGFG*QMPIWLPR 334
+F ++NT L+IW R +R K+ YH + P+W R
Sbjct: 900 IFLKSNTTLYIW---VRTRDIRIPTKVMVYHNNAGRFPMWFLR 939
>AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-PA,
isoform A protein.
Length = 1243
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 462 LFRRTNTPLFIWRSLNSCRTLRTSVKLG*YHGFG*QMPIWLPR 334
+F ++NT L+IW R +R K+ YH + P+W R
Sbjct: 1054 IFLKSNTTLYIW---VRTRDIRIPTKVMVYHNNAGRFPMWFLR 1093
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,477,902
Number of Sequences: 53049
Number of extensions: 358927
Number of successful extensions: 818
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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