Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20076
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 36 0.005
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.099
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 31 0.13
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 30 0.30
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.30
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.30
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 30 0.40
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 28 1.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 28 1.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.2
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 28 1.6
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 28 1.6
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 28 1.6
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 28 1.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 1.6
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 2.1
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 2.1
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 27 2.8
SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr... 27 2.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 2.8
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 3.7
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 26 4.9
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 4.9
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 26 4.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 4.9
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 26 4.9
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 26 4.9
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 26 4.9
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 26 6.5
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPAC23H4.09 |cdb4||curved DNA-binding protein Cdb4|Schizosacchar... 26 6.5
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 8.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.6
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 8.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 25 8.6
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 25 8.6
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 33 EEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNA 212
+E T L K + ++ I+ L+EEN L D ITKEK+ +ELE+ + + N
Sbjct: 502 QEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNV 561
Query: 213 FELD 224
EL+
Sbjct: 562 SELN 565
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.9 bits (69), Expect = 0.099
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 33 EEKTLSLSEKEN--KLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQ 206
EE+T L E+ N K+ EL ST+N +E+ ++SLN+ E+ S+ ERS +
Sbjct: 1608 EEETEWLQEEVNIMKIKELTSTVNKYREQLAMVQSLNE----HAESSLSKAERSKNYLTG 1663
Query: 207 NAFELDKM 230
E++++
Sbjct: 1664 RLQEVEEL 1671
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +1
Query: 499 TNEQYEALKRDYDAAVKDL----ESSREAVNQLTTQKDLVEGRIAELESDIRTEQ 651
T + E L+R DA + +L ES++E N+LT K+ R+ +L +D++ EQ
Sbjct: 831 TTQTDEYLRRK-DALINNLQNQLESTKEVANELTITKE----RVLQLTNDLQEEQ 880
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 31.5 bits (68), Expect = 0.13
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 296 NEAKSLLEQNLA--LKEQCEEKTRDCSRLEINIKTHEKTAEIQNRMIMRLQKQKQEDDKL 469
+E L+E+ L +KE+ EK + LE N+KTH K + ++ + R+ ++E ++L
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHK--DYKHALKKRITALEEEKNRL 448
Query: 470 FIE 478
E
Sbjct: 449 IKE 451
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 33 EEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNA 212
EEK+L L NK+ + I+ L E + +SL + +TK + + + R E
Sbjct: 9 EEKSLQLYPLSNKIRHVNPNISALPSETDISESLTNDLTKLEISNYAPFNRDLETFSDLI 68
Query: 213 FELDKMK 233
F L ++
Sbjct: 69 FGLTNIQ 75
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.30
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +3
Query: 18 SDTKNEEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDV-ITKEKETQASELERSCE 194
++ K EK++ ++E L+E + + L+ EN++L ++DV I K+++ + S L+ E
Sbjct: 1014 TNQKMNEKSI---QQEGSLSESLKRVKKLERENSTL--ISDVSILKQQKEELSVLKGVQE 1068
Query: 195 VIKQNAFE-LDKMKADILMLN*LSKRIQ 275
+ N E ++ ++AD+ L L K ++
Sbjct: 1069 LTINNLEEKVNYLEADVKQLPKLKKELE 1096
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.3 bits (65), Expect = 0.30
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 54 SEKENKLTELVSTINGLKEENNS-LKSLNDVITKEKET--QASELERSCEVIKQNAFELD 224
S+ KLT I+ LKEEN S +++ V +K ET ++S+LE E +K E++
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVE 1003
Query: 225 KMKADILMLN 254
+ +L N
Sbjct: 1004 VERNALLASN 1013
Score = 29.1 bits (62), Expect = 0.70
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 466 TIHREKN*IERTNEQYEALKRDYDAAVKDLESSREAVNQ-LTTQKDLVEGRIAELESDI 639
TI + I + YE D D+ ++DL + E +N L +K V+ E ES+I
Sbjct: 1517 TIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESEI 1575
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 29.9 bits (64), Expect = 0.40
Identities = 21/96 (21%), Positives = 41/96 (42%)
Frame = +1
Query: 367 LSPRN*HQNTRENCRNPKQNDYETSKTETGRR*TIHREKN*IERTNEQYEALKRDYDAAV 546
L +N + R +QN + + R+ + + + E EA K + A
Sbjct: 32 LKNKNRSTKVQAKIRQIEQNAAASGSKDAKRQEALRKRR---EEEKRAAEAAKAEVAALF 88
Query: 547 KDLESSREAVNQLTTQKDLVEGRIAELESDIRTEQT 654
+ + N LT ++++ E + +L SD+R +QT
Sbjct: 89 NAIPKKQTPQNFLTRKEEVKESQKIDLYSDVRDQQT 124
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 281 VETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNRMIMRLQKQKQED 460
+ L+ + K L EQN L+ Q T++ L N+K+++ I + ++K ++ +
Sbjct: 366 ITELETKLKELHEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKKLERIE 425
Query: 461 D--KLFIEKKTKLNEL 502
KL E K KL +
Sbjct: 426 GLVKLVDEYKLKLESM 441
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 18 SDTKNEEKTL--SLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSC 191
S+++ E K L S EK+ ++ E V+ + L+E+NN ++ + + EL
Sbjct: 463 SESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELR 522
Query: 192 EVIKQNAFELDKMK 233
+++++ + K++
Sbjct: 523 KLLREQTQDSQKLR 536
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 218 TGQDESRYIDVKLT-IKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKT 394
T + ++ KLT +KE + E + LL+ K + E+ + R +
Sbjct: 369 TSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERTQRE-GN 427
Query: 395 HEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKL 493
+ + +E+Q +I L++ +++K EKK +
Sbjct: 428 YARASELQYAIIPELERSVPKEEKTLEEKKPSM 460
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 36 EKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVIT--KEKETQASELERSCEV 197
EKTL+ +N + +S + +EENN + +D+I+ ++E Q EL +C++
Sbjct: 494 EKTLNTQPWKNLIENFISELQAEEEENN-ITEWSDIISVRNDEENQIYELP-TCQL 547
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 54 SEKENKLTELVSTINGLKEENNSLKSLNDVITKEK 158
SE EN + L + LK NN L + D +T+EK
Sbjct: 321 SENENTIRRLALENHELKNSNNQLNNHIDDLTREK 355
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 51 LSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNAFELDKM 230
L + + K+T +STI EE + ++ + I++ E + EL+ I+ E+D
Sbjct: 269 LIQDQEKITNRLSTIEKELEELSKDQTADQAISRRLERERDELDLRLLDIQNKLSEMDSD 328
Query: 231 KAD 239
+A+
Sbjct: 329 RAE 331
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 33 EEKTLSLSEKENK----LTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVI 200
E +L++ +NK L S I L+EENNSLK + + +E ++ E +
Sbjct: 338 EGASLAMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSSL 397
Query: 201 KQNAFELDKMKA 236
Q + + K+++
Sbjct: 398 DQQSANVQKLES 409
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 51 LSEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQASELERSCE 194
+SEKEN+L+E++ N + E + L ++ +K++ + R+ +
Sbjct: 337 ISEKENELSEILPKYNAIVSEADDLNKRIMLLKNQKQSLLDKQSRTSQ 384
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 27 KNEEKTLSLSEKENKLTELVSTINGLKEENNSLKSLNDVITKEK-ETQASELERSCEVIK 203
KN+E T +E E E+ S + + S S + ITKE+ E SE ER+ + +
Sbjct: 1442 KNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKERTEKELA 1501
Query: 204 QNAFELDKMKAD 239
+ EL+ ++++
Sbjct: 1502 DSKNELEHLQSE 1513
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 490 IERTNEQYEALKRDYDAAVKD-LESSREAVNQLTTQKDLVEGRIAELESDIR 642
++ +N + E L ++ ++ LES +EA L +Q + +E ++ LES ++
Sbjct: 315 LQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLK 366
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 493 ERTNEQYEALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAEL 627
E T E+Y K YD A +E+ E + ++ DL+E + L
Sbjct: 807 ELTEEEYYEWKEKYDIAASAIENREEQIEEVA---DLIESHLTLL 848
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 505 EQYEALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESDIR 642
++Y +D+ +A K LES R+A L + + + LE DIR
Sbjct: 122 KRYLVQAKDFHSARKKLESRRQAYESLLQKSFKEKKEDSRLEEDIR 167
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 27.1 bits (57), Expect = 2.8
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Frame = +3
Query: 24 TKNEEKTLSLSEKENKLTELVSTINGLKEENNSLK---SLNDVITKEKETQASE---LER 185
+K E +T + + + + E S + LKE+ +SLK D+ E E SE L+R
Sbjct: 324 SKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDISISEFEKMVSEREQLDR 383
Query: 186 SCEVIKQNAFELDK--MKADILM---LN*LSKRIQ 275
+ +I EL K D+L+ ++ L K++Q
Sbjct: 384 NLNMIGSKISELRKEVFDTDLLIQASIDSLEKKVQ 418
>SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 179
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 33 EEKTLSLSEKENKLTELVSTINGLKEENNSL--KSLNDVITKEKETQASELERSCEVIKQ 206
EE+ L LS + LTE+ S +KEE + + + + D++ K + + V+K
Sbjct: 24 EEEDLLLSSTKQWLTEIESEQTNIKEERDPIDPQEIYDLLAKINDPEHPLTLAQLSVVKL 83
Query: 207 NAFE-LDKMKAD 239
E +D ++ D
Sbjct: 84 EDIEVVDNVEGD 95
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -1
Query: 677 ASSSEILAVCSVRISDSSSAIRPSTRSFCVVNWFTASLLDSRSFTAAS*SLFRASYCSLV 498
ASSS + + ++SS A P T S VV+ + S +DS + +S S+ ++S S++
Sbjct: 341 ASSSSSASATATSSAESSIATSPITSSSNVVSSISTSSMDSSA--VSSYSVVQSSLASII 398
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.7
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +2
Query: 227 DESRYIDVKLTIKENTVVVETLKNEAKS--LLEQNLALKEQCEEKTRDCSRLEINIKTHE 400
DE D +++ V++E N+ S + E+ + + EE+T D ++ E+ + E
Sbjct: 395 DEDEESDQYSDVEDTEVIIEDQDNQEISNHVAEEKI---DSDEEETIDDAKSEMFVDLSE 451
Query: 401 KTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNEL 502
+ Q + QK+ QE+ + E + + NEL
Sbjct: 452 EEEVRQYEEYRKKQKELQEELEFPDEVELQPNEL 485
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 18 SDTKNEEKTLSLSEKENKLTELVSTINGLKEENNSLKS-LNDVITKEKETQASELERS 188
S EEK+ SEK++K T S ++G + + S L + +EK+ S++ S
Sbjct: 152 SAKSGEEKSAPSSEKQSKETSSPSNVSGEERGDRVFASPLARKLAEEKDLDLSQIRGS 209
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 245 DVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNR 424
D+ T K+N V + ++ K L+++ C+E+ R L++N+K+ + + ++
Sbjct: 450 DLNATRKKNGVYLA--ESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSK 507
Query: 425 MIMRLQKQKQEDDKLFIEKKTKLNEL-TNNMKL 520
+K+ + + T+L + + N KL
Sbjct: 508 SNQEHKKEVEALQLQLVNSSTELESVKSENEKL 540
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 15 NSDTKNEEKTLSLSEKENKLTELVSTINGLKE-ENNSLKSLNDVITKEK 158
+++TK +EK+ + +E + E +S + KE NSLK L+D +++ K
Sbjct: 31 DTETKEDEKSSFSNSEEESIIENLSDSSVNKEYAKNSLK-LSDAVSESK 78
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 93 INGLKEENNSLKSLNDVITKEKETQASELERSCEVIKQNAFE 218
+ L+EE ++ K D+ KE+ Q +L S + K N E
Sbjct: 608 LKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEE 649
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 4.9
Identities = 29/108 (26%), Positives = 48/108 (44%)
Frame = +2
Query: 194 SNKTKRLRTGQDESRYIDVKLTIKENTVVVETLKNEAKSLLEQNLALKEQCEEKTRDCSR 373
S+KTK R DE + ++K +K +++L AKS + E E D
Sbjct: 50 SSKTKEFRKQPDEVKLGEMKGLLKLYQSGIDSLTKRAKSAEATFFRVYETLGE-VPDPYP 108
Query: 374 LEINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLNELTNNMK 517
L I + KT + I L+K+K+E + ++ K KL N++
Sbjct: 109 LLIEAANNLKT----QKQIEDLKKEKEEMEG-SLQGKEKLEREVENLR 151
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 275 VVVETLKNEAKSLLEQNLALKEQCEEKTRDCSRLEINIKTHEK 403
V ETL + KSL+ + L E+ +E + + I++K HE+
Sbjct: 2 VTGETLVDSQKSLINNDTLLNEKLKEDFEE--NVSIDVKIHEE 42
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 354 FSSHCSFKARFCSNNDLASFFKVSTTTVFSLIVNLTSI 241
+ CSFKA +N S F S T +L++ LT +
Sbjct: 288 YEGDCSFKAETTANIKFGSHFP-SKTVPLALVIRLTHV 324
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 389 KTHEKTAEIQNRMIMRLQKQKQEDDKLFIEKKTKLN 496
K H + E + MR +QKQ++ +E+K K N
Sbjct: 149 KKHMREFEQIKKSAMRYDRQKQKEKIKMVEQKNKRN 184
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 314 LEQNLALKEQCEEKTRDCSRLEINIKTHEKTAEIQNR 424
++QN AL+ + E TR+ L+ + T E E+Q +
Sbjct: 528 IKQNNALQNRLEALTRENELLQSRVTTLEMEKEVQEK 564
>SPAC23H4.09 |cdb4||curved DNA-binding protein
Cdb4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 427 DYETSKTETGRR*TIHRE--KN*IERTNEQYEALKRDYDAAVKDLESSREAVNQLTTQKD 600
DY S ET + I E +N I++ E + + YD V+ E EA+ ++ KD
Sbjct: 13 DYSLSNPETVNKYKIAGEVSQNVIKKVVELCQPGAKIYDICVRGDELLNEAIKKVYRTKD 72
Query: 601 LVEG 612
+G
Sbjct: 73 AYKG 76
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +1
Query: 505 EQYEALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESDI 639
E + + +YDA + + +E ++L T+ +EG+ E ++++
Sbjct: 798 ELHNPVNLNYDAQLSKISEIKENYDELLTRYRELEGKFLESQAEV 842
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = -1
Query: 677 ASSSEILAVCSVRISDSSSAIRPSTRSFCVVNWFTASLLDSRSFTAAS*SLFRASYCS 504
A++S L+ SV I SSS++ S+ + + + ++S L S SFT+ + S F S S
Sbjct: 29 AAASTSLSSSSV-IPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVS 85
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 493 ERTNEQYEALKRDYD 537
E+TN+ +EAL DYD
Sbjct: 322 EKTNQAFEALSADYD 336
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 SEKENKLTELVSTINGLKEENNSLKSLNDVITKEKETQA-SELERSCEVIKQNAFE 218
+E NKL+ + S ++ +++ + KSL + +E+E + +E + E+ Q + E
Sbjct: 101 TETANKLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLE 156
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/45 (17%), Positives = 26/45 (57%)
Frame = +2
Query: 344 CEEKTRDCSRLEINIKTHEKTAEIQNRMIMRLQKQKQEDDKLFIE 478
C+E + N+K +EK ++++ + L++ ++++D + ++
Sbjct: 265 CKEALKTRFDFGFNVKVYEKLEKLESSLQFELKRNERDNDFIHLQ 309
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,402,906
Number of Sequences: 5004
Number of extensions: 43077
Number of successful extensions: 258
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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