Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20076
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   3.0  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   7.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   9.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 63  ENKLTELVSTINGLKEENNSLKS 131
           EN + +LVS  + + EEN  LK+
Sbjct: 94  ENSVKQLVSDCSTISEENPHLKA 116



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 135 NDVITKEKETQASELERSCEVIKQNAFELDK 227
           NDVI    + +  +++  CE I +N   LDK
Sbjct: 45  NDVIEGNIDVEDKKVQLYCECILKNFNILDK 75


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 CGGKGSRVKQRSGEPIDYTERSC 605
           C G+ S   Q SG  I   ERSC
Sbjct: 53  CRGRCSSYLQVSGSKIWQMERSC 75


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  LVSTINGLKEENNSLKSLNDVITKEKETQASELERSCEVIK 203
           +V T  GLK  N++  +LN V+       + +++    VIK
Sbjct: 230 VVYTRMGLKIRNSTKDTLNSVVQGAIHGDSRQIQSRKSVIK 270


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 550 PLPPHHNLSSELHI 509
           P PP+H LS   H+
Sbjct: 96  PYPPNHPLSGSKHL 109


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 517 ALKRDYDAAVKDLESSREAVNQLTTQKDLVEGRIAELESD 636
           ALK    A  K L S  +A N     ++L +GR  + +S+
Sbjct: 449 ALKPFIPAVTKSLASLTDAENSRRAMENLGDGRNNKEDSE 488


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 550 PLPPHHNLSSELHI 509
           P PP+H LS   H+
Sbjct: 96  PYPPNHPLSGSKHL 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,742
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)