Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20075
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.51
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 31 0.88
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 31 0.88
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 30 1.5
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 30 2.0
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.7
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.7
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.7
U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80455-5|AAB37883.1| 216|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016665-7|AAL02469.1| 110|Caenorhabditis elegans Skn-1 depende... 28 8.2
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 524
R R C C K C +CC TC R CT RP C
Sbjct: 70 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 524
R R C C K C +CC TC R CT RP C
Sbjct: 72 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 524
R R C C K C +CC TC R CT RP C
Sbjct: 75 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 107
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 269 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 400
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 269 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 400
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 407 YLAASIESACHDIQYPAIAKICKDNTAHFENYIHTFSNRTHRPR 538
Y+ ++ ++Q+P + + CKD H YI+ F N HR R
Sbjct: 348 YVQGPFAASFSNVQFPQV-EACKDYWWHNLLYINNFDNSQHRER 390
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1
Query: 675 RRTPSTTGFSKELIFMLDGHVGAFLVQRNNIVQF 574
+RTPST+ F LI+++D G +NIVQF
Sbjct: 1289 KRTPSTSNFFGNLIYVVD-QSGNSYADHSNIVQF 1321
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 524
R R C C C +CC C R CT RP C
Sbjct: 90 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 583 CPISCCYTCRRFCTLSRPMC 524
C CC CRR CT R C
Sbjct: 89 CRPRCCCCCRRCCTCCRTCC 108
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 524
R R C C C +CC C R CT RP C
Sbjct: 88 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 118
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 583 CPISCCYTCRRFCTLSRPMC 524
C CC CRR CT R C
Sbjct: 87 CRPRCCCCCRRCCTCCRTCC 106
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 524
R R C C C +CC C R CT RP C
Sbjct: 89 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 119
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 583 CPISCCYTCRRFCTLSRPMC 524
C CC CRR CT R C
Sbjct: 88 CRPRCCCCCRRCCTCCRTCC 107
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 524
R R C C C +CC C R CT RP C
Sbjct: 90 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 583 CPISCCYTCRRFCTLSRPMC 524
C CC CRR CT R C
Sbjct: 89 CRPRCCCCCRRCCTCCRTCC 108
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 474 KTTRPISKITYIRSQIEHIGRDNVQNRR 557
KTT PI KIT + +E IG+ + RR
Sbjct: 79 KTTTPIKKITVFQKPVEPIGKGPRRRRR 106
>Z81098-5|CAB97235.1| 330|Caenorhabditis elegans Hypothetical
protein K07A12.7 protein.
Length = 330
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Frame = +3
Query: 369 EDSKMLKTLLMRNIWLRASNRRATISSILRSRRYAKTTRPIS--KITY-IRSQIEHIG-- 533
+++K T L IWL + RR + ILR R + I+ KI+Y + Q H+
Sbjct: 171 QETKKKPTWLTHRIWLVINERRKALR-ILRERNETAFEKTIAALKISYHVPKQPAHVKTR 229
Query: 534 --------RDNVQNRRHV*QHEIGQYYFVEQEKHQRARQA*RSA 641
+ V+N + E+ + Y E E+H+R Q R A
Sbjct: 230 KAWAEAQLKLRVENEKEKRLEELHEKYDKEVEEHKRETQEKRKA 273
>U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical
protein C18A11.4 protein.
Length = 190
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 651 FSKELIFMLDGHVGAFLVQRNN 586
F KEL++ H+G FL+ RNN
Sbjct: 95 FGKELLYWNGPHIGQFLIIRNN 116
>U80455-5|AAB37883.1| 216|Caenorhabditis elegans Hypothetical
protein T01D1.3 protein.
Length = 216
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 200 LRDKYRRMC*GTTSMVRELKRGAECGAVGHCTATVWEKQKPDVSDNEIS 346
LRD+Y R+C G + RE K C A + ++ E + D E++
Sbjct: 34 LRDEYVRVCTGANTKRREQKDKDFCNAFENICFSIPEGEPDKAKDAEVT 82
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 583 CPISCCYTCRRFCTLSRPMC 524
C CC CRR CT R C
Sbjct: 88 CRPKCCCCCRRCCTCCRTCC 107
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 622 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 524
R + C C C +CC C R CT RP C
Sbjct: 89 RPKCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 119
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 387 LTSLSPRNSFTNFDDISLSETSGFCFSHTVAVQCPTA 277
L SLS + +D ++S +S F T V CPTA
Sbjct: 347 LVSLSEKAQDVQSNDFTISASSAFTVISTSGVLCPTA 383
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -2
Query: 656 RDFPRS*SLCLTGTLVLFLFNEIILSNFML----LHMPTILHIVSADVFDLRTYVCNFRN 489
R P + S +T L + + + + N L +H+ ILH+ +A+ LR +R
Sbjct: 79 RSIPVTISTAITTFLSICILSFLSRLNHYLDPDPVHIVVILHVTTANSIFLRRCWDKYRR 138
Query: 488 GPC 480
GPC
Sbjct: 139 GPC 141
>AF016665-7|AAL02469.1| 110|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 7 protein.
Length = 110
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 436 PRYPVSCDREDMQRQHGPFRKLHTYVLKSNTSA-ETMCKIVGMCNNMKLDNIISLNKKST 612
PR P +MQ G R L T + TSA E + K V ++ L+ I++L + S
Sbjct: 8 PRTPRLLSSREMQNIEGKLRCLQTLLQNPKTSAIEELKKPVRSLSH-NLNTILNLGRTSY 66
Query: 613 NVPVKHK 633
V V+ +
Sbjct: 67 KVEVRKR 73
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 403 GISGCEHRIGVPRYPVSCDREDMQRQHGPFRKLHTYVLKSNTSAETMCKIVGMCN---NM 573
G S C GVP +P++C E+ + +T + T ET+ +I C ++
Sbjct: 653 GYSWCRDCKGVPHWPMNC--ENYAEWEKKWLVRYTMINAQGTGTETLLQITCSCKTFYSV 710
Query: 574 KLDN 585
KL N
Sbjct: 711 KLPN 714
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,697,937
Number of Sequences: 27780
Number of extensions: 423737
Number of successful extensions: 1310
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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