Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20074
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY907825-1|AAX92637.1|   67|Anopheles gambiae antimicrobial pept...    24   3.5  
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    23   6.2  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   8.2  

>AY907825-1|AAX92637.1|   67|Anopheles gambiae antimicrobial peptide
           defensin 3 protein.
          Length = 67

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 192 IVSVGTSVLKNLELSWTLGPKMYHKLCGKI 281
           +V+VG + LKNL      GPK  +  C  +
Sbjct: 16  LVAVGEAQLKNLACVTNEGPKWANTYCAAV 45


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 291 FTINNK*ICTDARKGGRNALMCK 359
           F IN+K  C + RKGG     C+
Sbjct: 85  FQINSKTWCREGRKGGHCDKKCE 107


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 147 KKNKRHSSKHRYTNLIVSVGTSVLKNLELSWTLGPKMYHKL 269
           K  +RH  +  YT  I+++G  +L  LE +  LG +M   L
Sbjct: 95  KITRRHKDRPVYTEDILTIGEVLLNYLEQA--LGRQMSDSL 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,078
Number of Sequences: 2352
Number of extensions: 13666
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)