Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20073
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.8  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 84  YFCREAVMRFGLRGGTAVIK 143
           Y+  E V  + +RG TAV+K
Sbjct: 124 YYEAEVVSEYVIRGNTAVLK 143


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 537 FLLRYNISIIRLGLRISFRSRPWLC 611
           F++    +II LGL + +    W+C
Sbjct: 346 FMIYKTTNIIILGLNVVYVVTAWIC 370


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 537 FLLRYNISIIRLGLRISFRSRPWLC 611
           F++    +II LGL + +    W+C
Sbjct: 71  FMIYKTTNIIILGLNVVYVVTAWIC 95


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 339 GFLHHAYFCREKVL 380
           GFL   Y CRE  L
Sbjct: 76  GFLKECYCCRESFL 89


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 323 TTYHQFLCKEKIMFFLSY 270
           + Y   LC EKI  F  Y
Sbjct: 70  SVYASLLCTEKIFLFAIY 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,358
Number of Sequences: 336
Number of extensions: 2917
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)