Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20073
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023763-1|AAZ41771.1|  639|Drosophila melanogaster RE37786p pro...    29   3.9  
AE014134-1251|AAF52495.2|  745|Drosophila melanogaster CG4567-PA...    29   3.9  

>BT023763-1|AAZ41771.1|  639|Drosophila melanogaster RE37786p
           protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 477 LELHARSMHREYKCPMILG 533
           LE++A+ M REY CP+ LG
Sbjct: 495 LEIYAQRMEREYGCPVTLG 513


>AE014134-1251|AAF52495.2|  745|Drosophila melanogaster CG4567-PA
           protein.
          Length = 745

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 477 LELHARSMHREYKCPMILG 533
           LE++A+ M REY CP+ LG
Sbjct: 495 LEIYAQRMEREYGCPVTLG 513


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,199,145
Number of Sequences: 53049
Number of extensions: 556732
Number of successful extensions: 1174
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)