Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20072
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   3.5  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   4.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   6.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 368 CEYC*SFLNFMRFRLDIMYAH--EYSQY*PFTCIVKENGFK 484
           C YC    N+   +L ++  H   +S+  P  C+V E GFK
Sbjct: 129 CNYC----NYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFK 165


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 502 NLPFRSYSKYLIKNA 546
           NLPFRS+S  L+K++
Sbjct: 327 NLPFRSFSTNLVKHS 341


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 7   HSPSSDKSVENYEQNALHSPNGKLKTTQ 90
           H P   + V +   NA+H P G   T Q
Sbjct: 817 HDPQKLRIVVSKSANAMHPPRGSRHTRQ 844


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,860
Number of Sequences: 2352
Number of extensions: 16125
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)