Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20072
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121660-1|AAM51987.1|  670|Drosophila melanogaster RE06985p pro...    30   3.1  
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    30   4.1  
AL031765-5|CAA21123.1|  670|Drosophila melanogaster EG:22E5.11 p...    30   4.1  
AE014298-314|AAF45709.2|  670|Drosophila melanogaster CG4322-PA ...    30   4.1  
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    30   4.1  

>AY121660-1|AAM51987.1|  670|Drosophila melanogaster RE06985p
           protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 285 VLKFPVWCVRSVCSRVLTVGKLLKCSVTVNIVEVS*I-LCVLDWI*CMLTSTHSINRLLA 461
           V+ F +  V  +C  +LTV  LLKC    N+     I LC+ D + C L       R + 
Sbjct: 41  VMTFLIMIV-GICGNLLTVVALLKCPKVRNVAAAFIISLCIADLLFCALVLPFQGLRFVQ 99

Query: 462 SLRKTGLNL 488
              + GL L
Sbjct: 100 GTWRHGLVL 108


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
           16 protein.
          Length = 1518

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 16  SSDKSVENYEQNALHSPNGKLKTTQRAKIQRYSTTDLYKPKLHYLSRRNN 165
           S  +S + ++     SP G+  TT  AK+QR S   L  P   Y S  NN
Sbjct: 532 SMSRSAQAFQPLCPMSPKGQAATTSAAKLQRRSLF-LVSPARRYPSGNNN 580


>AL031765-5|CAA21123.1|  670|Drosophila melanogaster EG:22E5.11
           protein.
          Length = 670

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 VLKFPVWCVRSVCSRVLTVGKLLKCSVTVNIVEVS*I-LCVLDWI*CML 428
           V+ F +  V  +C  +LTV  LLKC    N+     I LC+ D + C L
Sbjct: 41  VMTFLIMIV-GICGNLLTVVALLKCPKVRNVAAAFIISLCIADLLFCAL 88


>AE014298-314|AAF45709.2|  670|Drosophila melanogaster CG4322-PA
           protein.
          Length = 670

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 VLKFPVWCVRSVCSRVLTVGKLLKCSVTVNIVEVS*I-LCVLDWI*CML 428
           V+ F +  V  +C  +LTV  LLKC    N+     I LC+ D + C L
Sbjct: 41  VMTFLIMIV-GICGNLLTVVALLKCPKVRNVAAAFIISLCIADLLFCAL 88


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
           protein.
          Length = 1744

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 16  SSDKSVENYEQNALHSPNGKLKTTQRAKIQRYSTTDLYKPKLHYLSRRNN 165
           S  +S + ++     SP G+  TT  AK+QR S   L  P   Y S  NN
Sbjct: 758 SMSRSAQAFQPLCPMSPKGQAATTSAAKLQRRSLF-LVSPARRYPSGNNN 806


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,218,598
Number of Sequences: 53049
Number of extensions: 664768
Number of successful extensions: 1422
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)