Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20070
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35875-2 Cluster: Isoform I of P35875 ; n=2; Drosophila... 112 7e-24
UniRef50_P35875 Cluster: Poly [ADP-ribose] polymerase (EC 2.4.2.... 112 7e-24
UniRef50_UPI00015B52AF Cluster: PREDICTED: similar to poly(ADP-r... 79 1e-13
UniRef50_UPI0000E4A1FC Cluster: PREDICTED: similar to Poly [ADP-... 73 9e-12
UniRef50_Q4RR03 Cluster: Chromosome 14 SCAF15003, whole genome s... 68 2e-10
UniRef50_Q1RL29 Cluster: Zinc finger protein; n=1; Ciona intesti... 65 1e-09
UniRef50_P09874 Cluster: Poly [ADP-ribose] polymerase 1 (EC 2.4.... 60 4e-08
UniRef50_A5AIW8 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q4RR05 Cluster: Chromosome 14 SCAF15003, whole genome s... 50 4e-05
UniRef50_Q9ZP54 Cluster: Poly [ADP-ribose] polymerase 1 (EC 2.4.... 49 1e-04
UniRef50_Q1SGF1 Cluster: Putative poly [ADP-ribose] polymerase 3... 48 2e-04
UniRef50_UPI00004998EE Cluster: poly(ADP-ribose) polymerase; n=2... 47 4e-04
UniRef50_UPI0000DB7621 Cluster: PREDICTED: similar to DNA ligase... 46 0.001
UniRef50_Q5BY75 Cluster: SJCHGC03951 protein; n=1; Schistosoma j... 45 0.002
UniRef50_Q9N4H4 Cluster: Poly(ADP-ribose) polymerase pme-1; n=2;... 44 0.003
UniRef50_Q23M88 Cluster: Poly polymerase and DNA-Ligase Zn-finge... 44 0.003
UniRef50_UPI0000D55502 Cluster: PREDICTED: similar to ligase III... 43 0.006
UniRef50_Q7Z115 Cluster: NAD(+) ADP-ribosyltransferase-1A; n=2; ... 42 0.014
UniRef50_Q9FK91 Cluster: Poly [ADP-ribose] polymerase 3 (EC 2.4.... 41 0.024
UniRef50_UPI00006CA6BA Cluster: Poly polymerase and DNA-Ligase Z... 40 0.042
UniRef50_A0CXH1 Cluster: Chromosome undetermined scaffold_30, wh... 40 0.042
UniRef50_Q54X55 Cluster: Poly(ADP-ribosyl)transferase; n=2; Dict... 39 0.097
UniRef50_Q4SEP2 Cluster: DNA ligase; n=1; Tetraodon nigroviridis... 38 0.17
UniRef50_Q9LKB5 Cluster: Genomic DNA, chromosome 3, TAC clone:K1... 38 0.17
UniRef50_A4S6V0 Cluster: Predicted protein; n=3; Ostreococcus|Re... 38 0.17
UniRef50_Q4Q1U1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.30
UniRef50_A7SE93 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.30
UniRef50_Q7R013 Cluster: GLP_23_138_1700; n=1; Giardia lamblia A... 37 0.39
UniRef50_Q38AV1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A2WUU8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q0JJI5 Cluster: Os01g0737300 protein; n=2; Oryza sativa... 34 2.8
UniRef50_Q4RQP9 Cluster: Chromosome 2 SCAF15004, whole genome sh... 33 4.8
UniRef50_UPI00015C4809 Cluster: aspartyl/glutamyl-tRNA(Asn/Gln) ... 33 6.4
UniRef50_Q1JT50 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_UPI00004988DF Cluster: protein kinase; n=1; Entamoeba h... 33 8.4
UniRef50_A0DL72 Cluster: Chromosome undetermined scaffold_55, wh... 33 8.4
>UniRef50_P35875-2 Cluster: Isoform I of P35875 ; n=2; Drosophila
melanogaster|Rep: Isoform I of P35875 - Drosophila
melanogaster (Fruit fly)
Length = 805
Score = 112 bits (270), Expect = 7e-24
Identities = 49/75 (65%), Positives = 60/75 (80%)
Frame = +3
Query: 30 NSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
N ALKDF +EY+KSSR+TC CE KI KD +R+ K +YDTEVGMKYGGQP WHHL CF +
Sbjct: 105 NLALKDFGIEYAKSSRSTCRGCEQKINKDLVRLRKTVYDTEVGMKYGGQPLWHHLECFAQ 164
Query: 210 CRNELLYFAGGENLP 254
R+EL +FA GE++P
Sbjct: 165 LRSELGWFASGEDMP 179
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +1
Query: 523 FDRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
FD+ AD +TFGA+E+C EC Q +V+ GY C GN SEWTKC +P R
Sbjct: 270 FDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCNKLLKEPTR 321
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
+ EY+++ RATC C+ I KD +RI ++ K P W H CF K
Sbjct: 7 YLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKV---PNWFHKTCFFK 57
>UniRef50_P35875 Cluster: Poly [ADP-ribose] polymerase (EC 2.4.2.30)
(PARP) (ADPRT) (NAD(+) ADP- ribosyltransferase); n=9;
Endopterygota|Rep: Poly [ADP-ribose] polymerase (EC
2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP-
ribosyltransferase) - Drosophila melanogaster (Fruit
fly)
Length = 994
Score = 112 bits (270), Expect = 7e-24
Identities = 49/75 (65%), Positives = 60/75 (80%)
Frame = +3
Query: 30 NSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
N ALKDF +EY+KSSR+TC CE KI KD +R+ K +YDTEVGMKYGGQP WHHL CF +
Sbjct: 105 NLALKDFGIEYAKSSRSTCRGCEQKINKDLVRLRKTVYDTEVGMKYGGQPLWHHLECFAQ 164
Query: 210 CRNELLYFAGGENLP 254
R+EL +FA GE++P
Sbjct: 165 LRSELGWFASGEDMP 179
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +1
Query: 523 FDRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
FD+ AD +TFGA+E+C EC Q +V+ GY C GN SEWTKC +P R
Sbjct: 270 FDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCNKLLKEPTR 321
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
+ EY+++ RATC C+ I KD +RI ++ K P W H CF K
Sbjct: 7 YLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKV---PNWFHKTCFFK 57
>UniRef50_UPI00015B52AF Cluster: PREDICTED: similar to
poly(ADP-ribose) polymerase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to poly(ADP-ribose)
polymerase - Nasonia vitripennis
Length = 999
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3
Query: 6 KRAAPESDNSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRW 185
KRAA + S +FKVEY+KSSR+TC C + I R+ K ++++ ++GG RW
Sbjct: 114 KRAATDITASPYSEFKVEYAKSSRSTCKGCGMAIMIHTTRLSKKDFESKEARRFGGLERW 173
Query: 186 HHLPCFVKCRNELLYFAGGENLP 254
HHL CF K R E +F G N+P
Sbjct: 174 HHLDCFDKLRKEFQFFDVGTNIP 196
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/60 (53%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 502 PYRKTECFDRLADCMTFGALETCPECKHGQLVVDT-LGYKCTGNLSEWTKCTYQTDKPKR 678
P +E D LAD M FGALE CP+C GQ + GYKCTGN+SEW C TD P R
Sbjct: 272 PTGNSEILDALADVMYFGALEPCPKCG-GQFEYKSGTGYKCTGNVSEWAACENLTDDPVR 330
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
F+VEYSK+ RA C C+ I K+ +RI ++ + G +WHH CF
Sbjct: 7 FRVEYSKTGRAGCKVCKSPIAKESLRIATVV---QSPFHDGKMVKWHHANCF 55
>UniRef50_UPI0000E4A1FC Cluster: PREDICTED: similar to Poly
[ADP-ribose] polymerase 1 (PARP-1) (ADPRT) (NAD(+)
ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase
1), partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Poly [ADP-ribose] polymerase 1
(PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase 1)
(Poly[ADP-ribose] synthetase 1), partial -
Strongylocentrotus purpuratus
Length = 975
Score = 72.5 bits (170), Expect = 9e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Frame = +1
Query: 502 PYRKTECFDRLADCMTFGALETCPECKHGQLVVDT--LGYKCTGNLSEWTKCTYQT-DKP 672
P ++ D +AD M FGALE CPEC++GQLVV + L +KCTGNL+ WTKC Y++ D P
Sbjct: 232 PPGESRLLDSVADGMMFGALEKCPECENGQLVVSSSGLSFKCTGNLTSWTKCQYRSKDVP 291
Query: 673 K 675
+
Sbjct: 292 R 292
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 33 SALKDFKVEYSKSSRATC--PECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFV 206
+ L F V Y+ S RA C C KI +RI +L E + YG P W+H+ CFV
Sbjct: 66 TTLAQFIVGYASSGRAQCHGSGCSEKIAMKTVRIA-LLKPMEEHLDYGPTPCWYHVDCFV 124
Query: 207 KCRNE 221
+++
Sbjct: 125 NAKHK 129
>UniRef50_Q4RR03 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 841
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +1
Query: 502 PYRKTECFDRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
P ++ D LAD M FGALE C EC+ GQLV Y CTG++S WTKC Y+T PKR
Sbjct: 13 PSGESNVLDCLADGMAFGALEPCGECR-GQLVFKGDAYYCTGDISAWTKCVYKTTTPKR 70
>UniRef50_Q1RL29 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 565
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +3
Query: 21 ESDNSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
+S L+DF V+Y+ S+R+TC +CE KI KDEIRI D E + G RWHH+ C
Sbjct: 118 KSSKKTLQDFVVQYALSNRSTCKKCEEKIEKDEIRISHKEIDPE-KPQVGLIDRWHHVGC 176
Query: 201 FVKCRNELLYFAG 239
F+K R +L + G
Sbjct: 177 FIKSRKDLGWIDG 189
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 523 FDRLADCMTFGALETCPECKHGQLVVDTLG-YKCTGNLSEWTKCTYQTDKPKR 678
F+R+AD M FG L C C GQLV + G Y+C GN+S WT CT T KR
Sbjct: 287 FERVADGMLFGRLPLCTLCGDGQLVASSRGFYQCVGNISGWTSCTNTTLDVKR 339
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFV-KCR 215
+ EY+KSSRA+C C I KD +RI ++ G QP WHH CF +CR
Sbjct: 29 YLAEYAKSSRASCKLCMSHIEKDSLRIALMVQSRHFD---GKQPNWHHYTCFFGRCR 82
>UniRef50_P09874 Cluster: Poly [ADP-ribose] polymerase 1 (EC
2.4.2.30) (PARP-1) (ADPRT) (NAD(+)
ADP-ribosyltransferase 1); n=54; Eumetazoa|Rep: Poly
[ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT)
(NAD(+) ADP-ribosyltransferase 1) - Homo sapiens (Human)
Length = 1014
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 502 PYRKTECFDRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
P ++ DR+AD M FGAL C EC GQLV + Y CTG+++ WTKC +T P R
Sbjct: 273 PSGESAILDRVADGMVFGALLPCEECS-GQLVFKSDAYYCTGDVTAWTKCMVKTQTPNR 330
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +3
Query: 39 LKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKCRN 218
L DF EY+KS+R+TC C KI K ++R+ K + D E + G RW+H CFVK R
Sbjct: 110 LGDFAAEYAKSNRSTCKGCMEKIEKGQVRLSKKMVDPE-KPQLGMIDRWYHPGCFVKNRE 168
Query: 219 EL 224
EL
Sbjct: 169 EL 170
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 33 SALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
S+ K ++VEY+KS RA+C +C I KD +R+ ++ + M G P W+H CF K
Sbjct: 4 SSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMV---QSPMFDGKVPHWYHFSCFWK 59
>UniRef50_A5AIW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1016
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +1
Query: 526 DRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
DR AD M FGAL CP C + Y+C G LS W+KC+Y T +P+R
Sbjct: 288 DRCADGMLFGALGHCPLCSSSLRYSGGM-YRCQGYLSAWSKCSYSTVEPER 337
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +3
Query: 42 KDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKCRNE 221
K +K EY+KSSR++C C+ I K++ R+ K++ ++ G P W+H C +K N+
Sbjct: 6 KPWKAEYAKSSRSSCKTCKTPIDKEKFRLGKMVQASQFD---GFMPMWNHAGCILKKANQ 62
Query: 222 L 224
+
Sbjct: 63 I 63
Score = 40.3 bits (90), Expect = 0.042
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +3
Query: 33 SALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
SA+ + +E S++SRATC C KI K E+RI G G WHH CF++
Sbjct: 102 SAVAECGIEVSQTSRATCKRCSQKIMKGEVRIS----SKPDGQGAKGL-AWHHANCFLE 155
>UniRef50_Q4RR05 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 233
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 21 ESDNSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
ES N L +K EY+KS RA+C +C+ I KD +R+ ++ + M G P WHH C
Sbjct: 3 ESQNDKL--YKAEYAKSGRASCKKCKENIAKDSLRMAIMV---QSPMFDGKVPHWHHFSC 57
Query: 201 F 203
F
Sbjct: 58 F 58
Score = 35.5 bits (78), Expect = 1.2
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 26/90 (28%)
Frame = +3
Query: 39 LKDFKVEYSKSSRATCPECEIKICK------------DEIRI----CKILYDTEVGM--- 161
L +F VEY+KS+R+TC CE KI K + +R+ +L+ ++ +
Sbjct: 110 LSEFAVEYAKSNRSTCKGCEQKIEKVGTEVYLDIKTIETLRVHHYFLSLLFQDQIRVSKK 169
Query: 162 -------KYGGQPRWHHLPCFVKCRNELLY 230
+ G RW+H CFV R ELL+
Sbjct: 170 TIDPEKPQLGLIDRWYHTACFVSRREELLF 199
>UniRef50_Q9ZP54 Cluster: Poly [ADP-ribose] polymerase 1 (EC
2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+)
ADP-ribosyltransferase 1); n=6; Magnoliophyta|Rep: Poly
[ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT
1) (NAD(+) ADP-ribosyltransferase 1) - Arabidopsis
thaliana (Mouse-ear cress)
Length = 983
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 526 DRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
D+ AD M FG L CP C G L Y+C G +SEW+KC++ T P R
Sbjct: 292 DKCADGMMFGPLALCPMCS-GHLSFSGGLYRCHGYISEWSKCSHSTLDPDR 341
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +3
Query: 30 NSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
N+A ++ +E S++SRA C +C KI K E+RI + G G WHH CF++
Sbjct: 108 NNAKLEYGIEVSQTSRAGCRKCSEKILKGEVRI----FSKPEGPGNKGL-MWHHAKCFLE 162
Query: 210 CRN--ELLYFAGGENLPD 257
+ EL +G ++PD
Sbjct: 163 MSSSTELESLSGWRSIPD 180
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 42 KDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVK 209
K ++ EY+KSSR++C C+ I K+ R+ K++ T G P W+H C +K
Sbjct: 6 KPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTHFD---GIMPMWNHASCILK 58
>UniRef50_Q1SGF1 Cluster: Putative poly [ADP-ribose] polymerase 3
(EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+)
ADP-ribosyltransferase 3); n=3; core eudicotyledons|Rep:
Putative poly [ADP-ribose] polymerase 3 (EC 2.4.2.30)
(PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) -
Medicago truncatula (Barrel medic)
Length = 799
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +1
Query: 529 RLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
R D + FGALE C C +G + D Y C G SEW+ CT+ T +P R
Sbjct: 100 RCQDLLFFGALEKCMVC-NGNMEFDGRRYGCRGFYSEWSSCTFSTREPPR 148
>UniRef50_UPI00004998EE Cluster: poly(ADP-ribose) polymerase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: poly(ADP-ribose)
polymerase - Entamoeba histolytica HM-1:IMSS
Length = 845
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 523 FDRLADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQT 663
+D AD + FG +E CP+C +L + C GN++E+ KC ++T
Sbjct: 118 YDAAADMLEFGVMEECPQCHEKKLENHIINIVCRGNMTEFVKCDFKT 164
>UniRef50_UPI0000DB7621 Cluster: PREDICTED: similar to DNA ligase 3
(DNA ligase III) (Polydeoxyribonucleotide synthase [ATP]
3); n=2; Apocrita|Rep: PREDICTED: similar to DNA ligase
3 (DNA ligase III) (Polydeoxyribonucleotide synthase
[ATP] 3) - Apis mellifera
Length = 1009
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +3
Query: 30 NSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
N K F VE +KS RA C +C+ I KD +RI K++ + G WHHL C
Sbjct: 3 NDEEKPFAVERAKSGRAKCKKCKCPIEKDTVRIAKLVANP---FTDGKMKAWHHLTC 56
>UniRef50_Q5BY75 Cluster: SJCHGC03951 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03951 protein - Schistosoma
japonicum (Blood fluke)
Length = 165
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
F V+Y+KS+R+ C +C+I+I ++ +RI +++ G PRW H CF
Sbjct: 7 FDVDYAKSNRSKCNKCKIEIDQNSLRIARLVQSPNFD---GKIPRWFHYKCF 55
>UniRef50_Q9N4H4 Cluster: Poly(ADP-ribose) polymerase pme-1; n=2;
Caenorhabditis|Rep: Poly(ADP-ribose) polymerase pme-1 -
Caenorhabditis elegans
Length = 945
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 517 ECFDRLADCMTFGALETCPECKHGQLVVDTL--GYKCTGNLSEWTKCTYQTDKPKR 678
+ +RL D FG C C +G++V ++ Y CTG +E++KCTY++ P R
Sbjct: 312 QVIERLVDNALFGCPIICQTCSNGKIVYNSSCRTYVCTGYATEYSKCTYESKNPIR 367
>UniRef50_Q23M88 Cluster: Poly polymerase and DNA-Ligase Zn-finger
region family protein; n=1; Tetrahymena thermophila
SB210|Rep: Poly polymerase and DNA-Ligase Zn-finger
region family protein - Tetrahymena thermophila SB210
Length = 244
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 54 VEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKCRNELLYF 233
+E +KS+R++C +C+ KI KDE+R+ + + W+H+ CF K + F
Sbjct: 6 IEKAKSARSSCKQCKQKIAKDEVRV-----GISISKGDYDETSWYHVSCFSKTK-----F 55
Query: 234 AGGENLPDL 260
AG +++ DL
Sbjct: 56 AGSKDIEDL 64
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 460 KRCRKNFGVQFTGNPYRKTECFDRLADCMTFGALETCPECKHGQL 594
K+ K G+ GN K E R+ADC T G L C +C G+L
Sbjct: 164 KQALKKNGMTQNGN---KQEIASRMADCQTMGTLPNCSKCGGGRL 205
>UniRef50_UPI0000D55502 Cluster: PREDICTED: similar to ligase III,
DNA, ATP-dependent (predicted); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to ligase III, DNA,
ATP-dependent (predicted) - Tribolium castaneum
Length = 853
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +3
Query: 24 SDNSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
SD K F VE +K RA C +C+ K + E+RI K++ + G WHH+ C
Sbjct: 2 SDELVEKPFLVEVAKQGRAVCKKCKQKCAQGELRIAKLVANP---FGEGKMKNWHHVNC 57
>UniRef50_Q7Z115 Cluster: NAD(+) ADP-ribosyltransferase-1A; n=2;
Dictyostelium discoideum|Rep: NAD(+)
ADP-ribosyltransferase-1A - Dictyostelium discoideum
(Slime mold)
Length = 938
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKC 212
+++EY+KS R+TC C+ I K+ +RI Y T+ G WHHL C KC
Sbjct: 9 YEIEYAKSDRSTCSTCQRGINKEAVRIG---YKTKSKHFDGMDVSWHHLKC--KC 58
Score = 39.5 bits (88), Expect = 0.074
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 532 LADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
L+D M G CP CK+ ++ + + Y+C G +S +TKC ++ D +R
Sbjct: 147 LSDWMLKGRPGRCPTCKNFDILFNGIEYQCKGWISGFTKCDWKGDSIER 195
>UniRef50_Q9FK91 Cluster: Poly [ADP-ribose] polymerase 3 (EC
2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+)
ADP-ribosyltransferase 3); n=6; Magnoliophyta|Rep: Poly
[ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT
3) (NAD(+) ADP-ribosyltransferase 3) - Arabidopsis
thaliana (Mouse-ear cress)
Length = 815
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 538 DCMTFGALETCPECKHGQLVVDT-LGYKCTGNLSEWTKCTYQTDKPKR 678
D + +GAL CP C G L+ D + C G +SEW C + T P R
Sbjct: 101 DLLFYGALAKCPLCG-GTLICDNEKRFVCGGEISEWCSCVFSTKDPPR 147
>UniRef50_UPI00006CA6BA Cluster: Poly polymerase and DNA-Ligase
Zn-finger region family protein; n=1; Tetrahymena
thermophila SB210|Rep: Poly polymerase and DNA-Ligase
Zn-finger region family protein - Tetrahymena
thermophila SB210
Length = 323
Score = 40.3 bits (90), Expect = 0.042
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 KDFKVEYSKSSRATCPECEIKICKDEIRI-CKILYDTEVGMKYGGQPRWHHLPCF 203
K+ K +Y+ SSRA C C++KI K+E+RI + L+ E W HL CF
Sbjct: 4 KELKFDYASSSRAGCKGCKMKIQKNELRIGLETLFQGE-----HTTTSWRHLECF 53
>UniRef50_A0CXH1 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 280
Score = 40.3 bits (90), Expect = 0.042
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 493 TGNPYRKTECFDRLADCMTFGALETCPECKHGQLVVDTL--GYKCTGNLSE 639
TGN K E +R+ADCM G LE CP C G+ ++ + +KC G + +
Sbjct: 210 TGN---KGELIERIADCMIKGCLEKCPNCSGGRPKLNPVQKNFKCPGYMDD 257
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 60 YSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
Y+ S RATC C+ KI KDE+R+ ++ + + Q +H CF
Sbjct: 16 YAPSGRATCKGCQAKIGKDELRLSNVIDE-----DHYHQEHHYHADCF 58
>UniRef50_Q54X55 Cluster: Poly(ADP-ribosyl)transferase; n=2;
Dictyostelium discoideum|Rep:
Poly(ADP-ribosyl)transferase - Dictyostelium discoideum
AX4
Length = 804
Score = 39.1 bits (87), Expect = 0.097
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 532 LADCMTFGALETCPECKHGQLVVDTLGYKCTGNLSEWTKCTYQTDKPKR 678
LAD +++G + CP C ++ D Y C G S +++CT+ + KR
Sbjct: 150 LADGLSYGRIGPCPSCNGLTVLYDGKNYYCRGFSSSFSRCTWHGQEVKR 198
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 54 VEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
VEYSKS+R++C +C+ I D IR+ +T + G +++HL C
Sbjct: 16 VEYSKSARSSCKKCKGTIGMDTIRVGT---ETPSRVFDGYDVKYYHLSC 61
>UniRef50_Q4SEP2 Cluster: DNA ligase; n=1; Tetraodon
nigroviridis|Rep: DNA ligase - Tetraodon nigroviridis
(Green puffer)
Length = 873
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 48 FKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
F VEY+K A C +C+ KI K +RI KI+ G W+H+ C
Sbjct: 6 FLVEYAKRGTAGCKKCKDKIVKGIVRIGKIV-PNPFSESAGEMKEWYHVKC 55
>UniRef50_Q9LKB5 Cluster: Genomic DNA, chromosome 3, TAC
clone:K15M2; n=6; Magnoliophyta|Rep: Genomic DNA,
chromosome 3, TAC clone:K15M2 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 774
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 57 EYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
EY+KSSR+TC +C I E+R+ + + + +WHHL CF
Sbjct: 411 EYAKSSRSTCKKCSQTIAAKELRLGLVTRN----FRGFDMKQWHHLGCF 455
Score = 35.9 bits (79), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 57 EYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
EY+KS+R++C C KI +R+ I G RWHH CF
Sbjct: 142 EYAKSNRSSCRSCSNKIAVKSLRLGLI----SKGRGGVDMTRWHHFDCF 186
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 63 SKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
+KSSR++C C I ++R+ + D+ G RWHHL CF
Sbjct: 260 AKSSRSSCNRCSQTIVSKDLRVGLVTEDSR-GFDI---TRWHHLGCF 302
>UniRef50_A4S6V0 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1086
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 57 EYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
EY+KS R C +C KI KD +RI + L G YG +W H C+
Sbjct: 36 EYAKSGRGKCGKCGEKIAKDAVRIGEPL--KYRGGDYGWISKWMHPECY 82
>UniRef50_Q4Q1U1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 285
Score = 37.5 bits (83), Expect = 0.30
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 6 KRAAPESDNSALKDFKVEYSKSSRATC--PECEIKICKDEIRICKILYDTEVGMKYGGQP 179
K+ SA+ VEYSKS RA C C KI K E+RI TEV M + +
Sbjct: 37 KQRVQRRRRSAMPKLCVEYSKSGRAKCSNTSCGKKIEKHELRI-----GTEVIMPFSEEG 91
Query: 180 ----RWHHLPCFVK 209
+W HL CF +
Sbjct: 92 VESWKWRHLCCFTE 105
>UniRef50_A7SE93 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 894
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 39 LKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPC 200
LK F VEY+ RA C C+ +I K RI K L G +W+H+ C
Sbjct: 5 LKSFLVEYAPQGRAKCKGCKEQIEKSSARIAK-LAPNPFSEDGGLMKQWYHVKC 57
>UniRef50_Q7R013 Cluster: GLP_23_138_1700; n=1; Giardia lamblia ATCC
50803|Rep: GLP_23_138_1700 - Giardia lamblia ATCC 50803
Length = 520
Score = 37.1 bits (82), Expect = 0.39
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 460 KRCRKNFGVQFTGNPYRKTECFDRLADCMTFGALETCPECKHGQLVVDTLGYKC 621
++C K F NP T+C A+C T G ++TC +C G + + G +C
Sbjct: 173 QQCTKCLPGFFETNPTTCTDCTGHCAECGTAGQIDTCTKCLPGFFLKSSGGKEC 226
>UniRef50_Q38AV1 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 240
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 39 LKDFKVEYSKSSRATC--PECEIKICKDEIRICKILYDTEVGMKYGGQP----RWHHLPC 200
+ +VEY+KS RA C C I K E+R+ + VG G+P +W H+ C
Sbjct: 1 MPQLRVEYAKSGRAKCSAASCNKPISKHEVRVGIAVMFQPVG-STSGEPTLSYKWRHVCC 59
Query: 201 FVK 209
F +
Sbjct: 60 FTE 62
>UniRef50_A2WUU8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 485
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 12 AAPESDNSALKDFKVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHH 191
AA ++N+++ VEY+KS R+TC C I +R+ + D G +W+H
Sbjct: 110 AAGVAENASIS---VEYAKSGRSTCKGCSESIAAGALRLGASIRDPR-GF---DSTKWYH 162
Query: 192 LPCF 203
+ CF
Sbjct: 163 IACF 166
>UniRef50_Q0JJI5 Cluster: Os01g0737300 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os01g0737300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 481
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 54 VEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCF 203
VEY+KS R+TC C I +R+ + D G +W+H+ CF
Sbjct: 128 VEYAKSGRSTCKGCSESIAAGALRLGASIRDPR-GF---DSTKWYHIACF 173
>UniRef50_Q4RQP9 Cluster: Chromosome 2 SCAF15004, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1224
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = -2
Query: 317 FQVVLSPFSQLSDLLS*DHQIWKILSSSEVQKFISAFNETRQ-VVPSWLSTIFHTNFCII 141
++++ F D + D + ++ ++ NE + P WL+ I + +
Sbjct: 914 YRIIFGDFPTNIDYAAFDIDACSVNGTNRLKPKCPVLNEHQMPAFPEWLTIIMLCIYLLF 973
Query: 140 *NLTYSNFILTNFNFTFRACGPTAFRIFNFEVLQ 39
N+ N ++ FNFTF+ +I+ F+ Q
Sbjct: 974 ANILLLNLLIAIFNFTFQEVQDNTDKIWKFQRYQ 1007
>UniRef50_UPI00015C4809 Cluster: aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit C (Asp/Glu-ADT subunit C); n=3;
Campylobacter concisus 13826|Rep:
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
C (Asp/Glu-ADT subunit C) - Campylobacter concisus 13826
Length = 780
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 413 NKLFD-KHRNALMNTNKKDVEKILEYNLQGIPTERL 517
N+ FD K+ N N N KDVEK L+ LQG E L
Sbjct: 696 NEFFDIKNINTFKNANIKDVEKFLDKELQGWTKEAL 731
>UniRef50_Q1JT50 Cluster: Putative uncharacterized protein; n=1;
Toxoplasma gondii RH|Rep: Putative uncharacterized
protein - Toxoplasma gondii RH
Length = 410
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 511 KTECFDRLADCMTFGALETCPECKHGQLVVDTLG--YKCTGNL---SEWTKCTYQT 663
K E R+A+ GA+ CPEC G L D Y C G + ++ +CT+++
Sbjct: 344 KEELVQRVAEGEVMGAVPKCPECNEGFLRFDHNSGVYSCPGFMDSEGDYHRCTFKS 399
>UniRef50_UPI00004988DF Cluster: protein kinase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 1883
Score = 32.7 bits (71), Expect = 8.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 517 ECFDRLADCMTFGALETCPECKHGQLVVDTLGYKCTG 627
EC RLA C+ + E C EC+ G + + + C+G
Sbjct: 571 ECSTRLAHCLKCSSSEECTECERGYYLSNGECFPCSG 607
>UniRef50_A0DL72 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_55,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 143
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 51 KVEYSKSSRATCPECEIKICKDEIRICKILYDTEVGMKYGGQPRWHHLPCFVKCRNE 221
+V Y+ S+R C C I KD+IRI +L G + + W+HL C + +
Sbjct: 6 EVGYALSNRVKCQNCLQNIVKDDIRIGHVL-TRPPGFGF-DKKIWYHLLCLTSIKGD 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,554,206
Number of Sequences: 1657284
Number of extensions: 10924804
Number of successful extensions: 31753
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 30378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31717
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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