Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20069
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   5.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   6.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    19   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   9.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    19   9.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 29  NFEKTDNKLLLLVLFNSF 82
           NFE+  NKL     FN F
Sbjct: 244 NFERLCNKLKRATRFNDF 261


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 10  GYDTIC*F*ENGQQTFV 60
           GY+ IC F  NG   F+
Sbjct: 293 GYNEICEFHRNGTVVFL 309


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 39  KRTTNFCYLYF 71
           K+T  +CY Y+
Sbjct: 108 KKTKRYCYYYY 118


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 36  RKRTTNFCYLYFLTPSSYAIS 98
           +KR +   Y+YFL    Y ++
Sbjct: 120 KKRWSQCMYMYFLLGFRYLVN 140


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 36  RKRTTNFCYLYFLTPSSYAIS 98
           +KR +   Y+YFL    Y ++
Sbjct: 434 KKRWSQCMYMYFLLGFRYLVN 454


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 85  DEGVKKYK*QKFVVRFLKINKLYH 14
           +E + KYK  + V+   K   L+H
Sbjct: 197 EESISKYKHAELVMPLCKSCDLHH 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,633
Number of Sequences: 336
Number of extensions: 1100
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)