Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20069
         (312 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY450653-1|AAR14283.1|   48|Homo sapiens immunoglobulin heavy ch...    29   3.8  
AY450651-1|AAR14281.1|   48|Homo sapiens immunoglobulin heavy ch...    29   3.8  
AY450650-1|AAR14280.1|   48|Homo sapiens immunoglobulin heavy ch...    29   3.8  
AY450649-1|AAR14279.1|   48|Homo sapiens immunoglobulin heavy ch...    28   6.7  

>AY450653-1|AAR14283.1|   48|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 48

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +2

Query: 128 GWVKMTRDVFVS---LQIRNYASDD 193
           GW+ MTRD F+S   +++R   SDD
Sbjct: 17  GWMTMTRDTFISTAYMELRRLRSDD 41


>AY450651-1|AAR14281.1|   48|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 48

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +2

Query: 128 GWVKMTRDVFVS---LQIRNYASDD 193
           GW+ MTRD F+S   +++R   SDD
Sbjct: 17  GWMTMTRDTFISTAYMELRRLKSDD 41


>AY450650-1|AAR14280.1|   48|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 48

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +2

Query: 128 GWVKMTRDVFVS---LQIRNYASDD 193
           GW+ MTRD F+S   +++R   SDD
Sbjct: 17  GWMTMTRDTFISIAYMELRRLRSDD 41


>AY450649-1|AAR14279.1|   48|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 48

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +2

Query: 128 GWVKMTRDVFVS---LQIRNYASDD 193
           GW+ MTRD F+S   +++R   SDD
Sbjct: 17  GWMTMTRDSFISTAYMELRRLRSDD 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,912,004
Number of Sequences: 237096
Number of extensions: 581959
Number of successful extensions: 705
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)