Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20064
(796 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7RR56 Cluster: Predicted protein; n=5; Nematostella ve... 76 1e-12
UniRef50_UPI0000E80B84 Cluster: PREDICTED: similar to phospholip... 74 5e-12
UniRef50_O15162 Cluster: Phospholipid scramblase 1 (PL scramblas... 71 3e-11
UniRef50_Q4S505 Cluster: Chromosome 6 SCAF14737, whole genome sh... 65 2e-09
UniRef50_UPI0000F2E10C Cluster: PREDICTED: similar to phospholip... 63 7e-09
UniRef50_Q9VZW1 Cluster: CG1893-PA; n=3; Sophophora|Rep: CG1893-... 62 2e-08
UniRef50_Q9NRY7 Cluster: Phospholipid scramblase 2 (PL scramblas... 60 5e-08
UniRef50_A0PG75 Cluster: Phospholipid scramblase family memmber ... 60 8e-08
UniRef50_A6QPD9 Cluster: Putative uncharacterized protein; n=3; ... 56 1e-06
UniRef50_UPI0000E465BD Cluster: PREDICTED: hypothetical protein;... 55 2e-06
UniRef50_Q9NRY6 Cluster: Phospholipid scramblase 3 (PL scramblas... 52 2e-05
UniRef50_Q5DH68 Cluster: SJCHGC02545 protein; n=2; Schistosoma j... 51 4e-05
UniRef50_Q7T1Q9 Cluster: Phospholipid scramblase 1; n=4; Euteleo... 50 9e-05
UniRef50_UPI0000F1E837 Cluster: PREDICTED: similar to GA16644-PA... 46 0.001
UniRef50_A5HBK2 Cluster: Scramblase 1; n=4; Caenorhabditis|Rep: ... 46 0.001
UniRef50_Q9NRQ2 Cluster: Phospholipid scramblase 4 (PL scramblas... 45 0.002
UniRef50_A5HBK4 Cluster: Scramblase 3; n=3; Caenorhabditis elega... 42 0.013
UniRef50_UPI0000E48E2A Cluster: PREDICTED: similar to hMmTRA1b, ... 42 0.018
UniRef50_UPI0000F1E836 Cluster: PREDICTED: hypothetical protein;... 41 0.031
UniRef50_Q4SF70 Cluster: Chromosome undetermined SCAF14608, whol... 41 0.031
UniRef50_UPI0000E4A09C Cluster: PREDICTED: hypothetical protein;... 40 0.072
UniRef50_Q8WYZ0 Cluster: Putative uncharacterized protein; n=2; ... 40 0.095
UniRef50_UPI0000E4A125 Cluster: PREDICTED: hypothetical protein;... 39 0.17
UniRef50_UPI00006C0754 Cluster: PREDICTED: similar to Phospholip... 39 0.17
UniRef50_UPI0000E48E34 Cluster: PREDICTED: similar to Phospholip... 38 0.38
UniRef50_UPI0000D5613B Cluster: PREDICTED: similar to CG9084-PB;... 36 1.5
UniRef50_Q1VPF6 Cluster: Tyrosine-protein kinase ptk; n=1; Psych... 34 4.7
UniRef50_Q6EVD1 Cluster: Putative resistance protein; n=4; BEP c... 34 4.7
UniRef50_Q9UT84 Cluster: Scramblase; n=1; Schizosaccharomyces po... 34 4.7
>UniRef50_A7RR56 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1617
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +1
Query: 559 WLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
W+ A+ +NCP GLEYL+M+DQL++ Q+VELLEAF G ETNNKY + N++GQ+
Sbjct: 72 WMPLPPAAPANCPPGLEYLTMVDQLLIKQQVELLEAFTGFETNNKYKITNNLGQQ 126
>UniRef50_UPI0000E80B84 Cluster: PREDICTED: similar to phospholipid
scramblase PLSCR isoform 2; n=1; Gallus gallus|Rep:
PREDICTED: similar to phospholipid scramblase PLSCR
isoform 2 - Gallus gallus
Length = 251
Score = 73.7 bits (173), Expect = 5e-12
Identities = 29/47 (61%), Positives = 41/47 (87%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
L NCP GLEYL+ IDQ+++HQ++ELLE F+G+E+NNKY + NS+GQ+
Sbjct: 78 LPNCPPGLEYLTQIDQILIHQQLELLEIFIGLESNNKYEIKNSLGQR 124
>UniRef50_O15162 Cluster: Phospholipid scramblase 1 (PL scramblase
1) (Ca(2+)-dependent phospholipid scramblase 1); n=39;
Eumetazoa|Rep: Phospholipid scramblase 1 (PL scramblase
1) (Ca(2+)-dependent phospholipid scramblase 1) - Homo
sapiens (Human)
Length = 318
Score = 71.3 bits (167), Expect = 3e-11
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +1
Query: 589 NCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
NCP GLEYLS IDQ+++HQ++ELLE G ETNNKY + NS GQ+
Sbjct: 94 NCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQR 138
>UniRef50_Q4S505 Cluster: Chromosome 6 SCAF14737, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
+ CP GLEYL +DQL++ QKVEL+EA +G E+NNKY V N++GQ
Sbjct: 11 IPGCPPGLEYLIQVDQLLIKQKVELIEALIGFESNNKYEVRNTLGQ 56
>UniRef50_UPI0000F2E10C Cluster: PREDICTED: similar to phospholipid
scramblase 4,; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to phospholipid scramblase 4, -
Monodelphis domestica
Length = 469
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQKFIM 732
L NCP GLEYLS +D++++HQ+V +LE ETNN+Y V NS GQ M
Sbjct: 154 LPNCPPGLEYLSQLDKVMVHQQVNILEMMTHFETNNRYEVKNSTGQMIYM 203
>UniRef50_Q9VZW1 Cluster: CG1893-PA; n=3; Sophophora|Rep: CG1893-PA
- Drosophila melanogaster (Fruit fly)
Length = 263
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
+ NCP+GLEYL+ +DQL++ QK+E LE G ET N++ V NS+GQ
Sbjct: 48 MPNCPQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQ 93
>UniRef50_Q9NRY7 Cluster: Phospholipid scramblase 2 (PL scramblase
2) (Ca(2+)-dependent phospholipid scramblase 2); n=30;
Euteleostomi|Rep: Phospholipid scramblase 2 (PL
scramblase 2) (Ca(2+)-dependent phospholipid scramblase
2) - Homo sapiens (Human)
Length = 224
Score = 60.5 bits (140), Expect = 5e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 589 NCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
NCP GLEYLS ID +++HQ++ELLE E++N Y + NS GQ+
Sbjct: 9 NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQR 53
>UniRef50_A0PG75 Cluster: Phospholipid scramblase family memmber 5;
n=13; Mammalia|Rep: Phospholipid scramblase family
memmber 5 - Homo sapiens (Human)
Length = 271
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +1
Query: 595 PRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQKFIMRLRIMIAAQELLRT 774
P GLEYLS +D +I+HQ+VELL +G ET+NKY + NS+GQ+ + I RT
Sbjct: 55 PPGLEYLSQLDLIIIHQQVELLGMILGAETSNKYEIKNSLGQRIYFAVEESICFN---RT 111
Query: 775 FTS 783
F S
Sbjct: 112 FCS 114
>UniRef50_A6QPD9 Cluster: Putative uncharacterized protein; n=3;
Eutheria|Rep: Putative uncharacterized protein - Bos
taurus (Bovine)
Length = 247
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +1
Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
S +NCP GLEYL+ I+ L + Q+ +LLE F ETN Y VMN+ GQ+
Sbjct: 6 STANCPPGLEYLTQINHLFVCQRFDLLEVFSPFETNKTYDVMNNQGQR 53
>UniRef50_UPI0000E465BD Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 388
Score = 54.8 bits (126), Expect = 2e-06
Identities = 20/48 (41%), Positives = 33/48 (68%)
Frame = +1
Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
++ CP GLEY+ ++QL++HQ++EL E + NKY + NS+GQ+
Sbjct: 155 AIPGCPPGLEYMVQLEQLLVHQQIELAEMITNINFENKYMIKNSMGQQ 202
>UniRef50_Q9NRY6 Cluster: Phospholipid scramblase 3 (PL scramblase
3) (Ca(2+)-dependent phospholipid scramblase 3); n=27;
Tetrapoda|Rep: Phospholipid scramblase 3 (PL scramblase
3) (Ca(2+)-dependent phospholipid scramblase 3) - Homo
sapiens (Human)
Length = 295
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
L P GLE+L IDQ+++HQK E +E F+G ET N+Y + + GQ
Sbjct: 69 LPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQ 114
>UniRef50_Q5DH68 Cluster: SJCHGC02545 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC02545 protein - Schistosoma
japonicum (Blood fluke)
Length = 230
Score = 50.8 bits (116), Expect = 4e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1
Query: 589 NCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
N P GLE+L+ +DQL + QKV+++E+FV E N+Y +N GQ
Sbjct: 8 NYPPGLEHLTQVDQLFIKQKVDVIESFVPFEAQNRYICLNKSGQ 51
>UniRef50_Q7T1Q9 Cluster: Phospholipid scramblase 1; n=4;
Euteleostomi|Rep: Phospholipid scramblase 1 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 196
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +1
Query: 622 IDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
+DQL+M QKVEL+EA VG E+NNKY + N +GQ
Sbjct: 1 VDQLLMKQKVELVEALVGFESNNKYEIRNVMGQ 33
>UniRef50_UPI0000F1E837 Cluster: PREDICTED: similar to GA16644-PA;
n=1; Danio rerio|Rep: PREDICTED: similar to GA16644-PA -
Danio rerio
Length = 378
Score = 46.0 bits (104), Expect = 0.001
Identities = 16/43 (37%), Positives = 31/43 (72%)
Frame = +1
Query: 595 PRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
P GLEYL+ +DQ+++ QK++ ++ + +N+Y + NS+GQ+
Sbjct: 201 PPGLEYLTQVDQVLVRQKIQCIKILTCYQPSNQYEIKNSIGQE 243
>UniRef50_A5HBK2 Cluster: Scramblase 1; n=4; Caenorhabditis|Rep:
Scramblase 1 - Caenorhabditis elegans
Length = 273
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
++ P GLEYL+ +D +++HQ EL+E ET NKY + N+ G++
Sbjct: 40 AIQGVPTGLEYLTYLDTIMVHQIKELIEIVTDWETKNKYVLKNANGEQ 87
>UniRef50_Q9NRQ2 Cluster: Phospholipid scramblase 4 (PL scramblase
4) (Ca(2+)-dependent phospholipid scramblase 4); n=17;
Theria|Rep: Phospholipid scramblase 4 (PL scramblase 4)
(Ca(2+)-dependent phospholipid scramblase 4) - Homo
sapiens (Human)
Length = 329
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
++NCP GLEYL +D + + Q E LE ETNN+Y + N+ Q
Sbjct: 106 MANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQ 151
>UniRef50_A5HBK4 Cluster: Scramblase 3; n=3; Caenorhabditis
elegans|Rep: Scramblase 3 - Caenorhabditis elegans
Length = 251
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 595 PRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
P GLEYL+ +D +++HQ +E +E G ET NKY + QK
Sbjct: 48 PGGLEYLAYLDTIMVHQFLEPIEIRTGWETKNKYAIKKICYQK 90
>UniRef50_UPI0000E48E2A Cluster: PREDICTED: similar to hMmTRA1b,
partial; n=7; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to hMmTRA1b, partial -
Strongylocentrotus purpuratus
Length = 53
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 550 LKWWLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLE 663
+ W A+ CP GLEYL +DQL++HQ VEL E
Sbjct: 16 VNWMPAPQVAAPQGCPPGLEYLMQVDQLLVHQIVELFE 53
>UniRef50_UPI0000F1E836 Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 263
Score = 41.1 bits (92), Expect = 0.031
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 595 PRGLEYLSMIDQLIMHQKVELLE 663
P GLEYL+ IDQ+++HQKVELLE
Sbjct: 90 PPGLEYLTQIDQILIHQKVELLE 112
>UniRef50_Q4SF70 Cluster: Chromosome undetermined SCAF14608, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF14608, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 301
Score = 41.1 bits (92), Expect = 0.031
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 595 PRGLEYLSMIDQLIMHQKVELLE 663
P GLEYL+ IDQ+++HQKVELLE
Sbjct: 50 PPGLEYLTQIDQILIHQKVELLE 72
>UniRef50_UPI0000E4A09C Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 287
Score = 39.9 bits (89), Expect = 0.072
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 592 CPRGLEYLSMIDQLIMHQKVELLE 663
CP GLEYL+ +DQL++HQ++EL E
Sbjct: 86 CPPGLEYLTHLDQLLVHQQIELAE 109
>UniRef50_Q8WYZ0 Cluster: Putative uncharacterized protein; n=2;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 223
Score = 39.5 bits (88), Expect = 0.095
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 583 LSNCPRGLEYLSMIDQLIMHQKVELLEAFVG 675
L P GLE+L IDQ+++HQK E +E F+G
Sbjct: 69 LPGVPSGLEFLVQIDQILIHQKAERVETFLG 99
>UniRef50_UPI0000E4A125 Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 38.7 bits (86), Expect = 0.17
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 592 CPRGLEYLSMIDQLIMHQKVELLE 663
CP GLEYL+ +DQ+++HQ+VE E
Sbjct: 36 CPPGLEYLTNVDQILVHQQVEFFE 59
>UniRef50_UPI00006C0754 Cluster: PREDICTED: similar to Phospholipid
scramblase 1 (PL scramblase 1) (Ca(2+)-dependent
phospholipid scramblase 1) (Transplantability-associated
protein 1) (TRA1) (NOR1); n=3; Homo/Pan/Gorilla
group|Rep: PREDICTED: similar to Phospholipid scramblase
1 (PL scramblase 1) (Ca(2+)-dependent phospholipid
scramblase 1) (Transplantability-associated protein 1)
(TRA1) (NOR1) - Homo sapiens
Length = 202
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 550 LKWWLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
L+ WL ++++CP GLEYL I+QL + Q + L ET+ Y ++N+ Q+
Sbjct: 36 LRPWLST-PETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQR 92
>UniRef50_UPI0000E48E34 Cluster: PREDICTED: similar to Phospholipid
scramblase 2, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Phospholipid
scramblase 2, partial - Strongylocentrotus purpuratus
Length = 108
Score = 37.5 bits (83), Expect = 0.38
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 556 WWLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
W A+ CP GLEYL+ +DQL++HQ ++ E + ++ + N +GQ+
Sbjct: 14 WMPAPQVAAPQGCPPGLEYLTQVDQLLVHQISKVGE-------DQRFAIKNGLGQR 62
>UniRef50_UPI0000D5613B Cluster: PREDICTED: similar to CG9084-PB;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9084-PB - Tribolium castaneum
Length = 279
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 601 GLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTV 702
GL++L + Q+I+ Q VEL + +E+ N+YTV
Sbjct: 60 GLDFLKDVHQIIIQQTVELTDLMASLESENRYTV 93
>UniRef50_Q1VPF6 Cluster: Tyrosine-protein kinase ptk; n=1;
Psychroflexus torquis ATCC 700755|Rep: Tyrosine-protein
kinase ptk - Psychroflexus torquis ATCC 700755
Length = 807
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 604 LEYLSMIDQLIMHQ-KVELLEAFVGVETNNKYTVMNSVGQKFIMRLRIMIAAQE 762
+E ++I++Q + ELL A +G++ +N T S QK I R ++M+++ E
Sbjct: 337 IELTESFKEVILNQDEFELLPANIGIDNSNLNTFTESYNQKIIERQKLMMSSTE 390
>UniRef50_Q6EVD1 Cluster: Putative resistance protein; n=4; BEP
clade|Rep: Putative resistance protein - Avena sativa
(Oat)
Length = 144
Score = 33.9 bits (74), Expect = 4.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 705 HNCVFVVCLDPNKSF**FNFLMHYQLVNHG-KVFQTSRAVAEACG 574
HN VF+ CLDP KS+ F +++N ++ + + VAE CG
Sbjct: 100 HNMVFLECLDPEKSWNLFKEKATEEVINSDPRIEKLAHEVAEQCG 144
>UniRef50_Q9UT84 Cluster: Scramblase; n=1; Schizosaccharomyces
pombe|Rep: Scramblase - Schizosaccharomyces pombe
(Fission yeast)
Length = 381
Score = 33.9 bits (74), Expect = 4.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 625 DQLIMHQKVELLEAFVGVETNNKYTVMNSVGQ 720
D LI+ +++E++ F+G E N+Y ++N GQ
Sbjct: 77 DVLIVERQLEMMNVFLGYEQANRYVILNQQGQ 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,191,016
Number of Sequences: 1657284
Number of extensions: 13100294
Number of successful extensions: 31845
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31830
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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