Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20064
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82084-5|CAB04981.1|  265|Caenorhabditis elegans Hypothetical pr...    50   1e-06
EF445110-1|ABQ01577.1|  265|Caenorhabditis elegans scramblase 2 ...    50   1e-06
Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical pr...    46   3e-05
Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical pr...    46   3e-05
EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1 ...    46   3e-05
EF445111-1|ABQ01578.1|  251|Caenorhabditis elegans scramblase 3 ...    42   4e-04
AF078785-2|AAC27093.1|  266|Caenorhabditis elegans Hypothetical ...    42   4e-04
Z81530-7|CAB04311.2|  292|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical p...    30   1.7  
U55857-4|AAA98029.1|  301|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical ...    28   8.9  
AL023845-4|CAA19541.1|  516|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z82084-5|CAB04981.1|  265|Caenorhabditis elegans Hypothetical
           protein ZK1053.5 protein.
          Length = 265

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = +1

Query: 559 WLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           W++   A +   P GLEYL+ +D +++HQ  E+LE   G E+ NKY + N  GQ+
Sbjct: 36  WMEALPA-IEGIPAGLEYLAYLDTVMVHQVKEVLEILTGWESKNKYAIRNKNGQQ 89


>EF445110-1|ABQ01577.1|  265|Caenorhabditis elegans scramblase 2
           protein.
          Length = 265

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = +1

Query: 559 WLDEYAASLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           W++   A +   P GLEYL+ +D +++HQ  E+LE   G E+ NKY + N  GQ+
Sbjct: 36  WMEALPA-IEGIPAGLEYLAYLDTVMVHQVKEVLEILTGWESKNKYAIRNKNGQQ 89


>Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical
           protein T22H2.5b protein.
          Length = 295

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +1

Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           ++   P GLEYL+ +D +++HQ  EL+E     ET NKY + N+ G++
Sbjct: 56  AIQGVPTGLEYLTYLDTIMVHQIKELIEIVTDWETKNKYVLKNANGEQ 103


>Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical
           protein T22H2.5a protein.
          Length = 289

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +1

Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           ++   P GLEYL+ +D +++HQ  EL+E     ET NKY + N+ G++
Sbjct: 56  AIQGVPTGLEYLTYLDTIMVHQIKELIEIVTDWETKNKYVLKNANGEQ 103


>EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1
           protein.
          Length = 273

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +1

Query: 580 SLSNCPRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           ++   P GLEYL+ +D +++HQ  EL+E     ET NKY + N+ G++
Sbjct: 40  AIQGVPTGLEYLTYLDTIMVHQIKELIEIVTDWETKNKYVLKNANGEQ 87


>EF445111-1|ABQ01578.1|  251|Caenorhabditis elegans scramblase 3
           protein.
          Length = 251

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +1

Query: 595 PRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           P GLEYL+ +D +++HQ +E +E   G ET NKY +     QK
Sbjct: 48  PGGLEYLAYLDTIMVHQFLEPIEIRTGWETKNKYAIKKICYQK 90


>AF078785-2|AAC27093.1|  266|Caenorhabditis elegans Hypothetical
           protein C04E12.7 protein.
          Length = 266

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +1

Query: 595 PRGLEYLSMIDQLIMHQKVELLEAFVGVETNNKYTVMNSVGQK 723
           P GLEYL+ +D +++HQ +E +E   G ET NKY +     QK
Sbjct: 48  PGGLEYLAYLDTIMVHQFLEPIEIRTGWETKNKYAIKKICYQK 90


>Z81530-7|CAB04311.2|  292|Caenorhabditis elegans Hypothetical
           protein F46A8.10 protein.
          Length = 292

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 604 LEYLSMIDQLIMHQKVELLEAFVGVETNNKYTV 702
           L+ L+    L++ Q +E LE F G+ET N+Y V
Sbjct: 77  LDVLAQTTSLMIVQCLEPLEIFTGIETPNRYVV 109


>U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical
           protein C18C4.9 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 597 SRFGIPFHD*PTDNASES*IIRSFCWGRDKQQIHSYEQCWSKV 725
           +++G PFH    D  + + I R+  WG  K +  + ++ W+K+
Sbjct: 292 NQYGCPFHAHLLDQFATAMIERTLEWGEKKDRTETTQRGWTKI 334


>U55857-4|AAA98029.1|  301|Caenorhabditis elegans Hypothetical
           protein K08D10.7 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 604 LEYLSMIDQLIMHQKVELLEAFVGVETNNKYTV 702
           L  ++  + L++ Q +E LE F G ET N+Y V
Sbjct: 84  LSAIAHTNSLMVVQCIEPLEIFTGFETPNRYVV 116


>AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical
           protein Y50E8A.9 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 604 LEYLSMIDQLIMHQKVELLEAFVGVETNNKYTV 702
           L+ +S  + +++ Q +E LE   G+ET N+Y V
Sbjct: 60  LDMISRTNSMMVVQALEPLEIATGIETPNQYVV 92


>AL023845-4|CAA19541.1|  516|Caenorhabditis elegans Hypothetical
           protein Y51B9A.6 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +3

Query: 366 EEEKRFSC-SIDKYSI-VEGAYRVA*FLIGVLLCYNQCF 476
           +EE R+ C   ++Y I V G + ++ FL+  ++CYN C+
Sbjct: 19  KEEGRYGCRGANRYIILVIGLFFLS-FLLSSIICYNACY 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,745,034
Number of Sequences: 27780
Number of extensions: 337471
Number of successful extensions: 867
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)