Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20062
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   124   1e-30
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   124   1e-30
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    97   1e-22
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.16 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.1  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  124 bits (298), Expect = 1e-30
 Identities = 56/84 (66%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
           AKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+
Sbjct: 98  AKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKS 157

Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
            +H+IVLVGGSTRIPKVQ+L+ ++
Sbjct: 158 AVHEIVLVGGSTRIPKVQQLITEY 181



 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 222 PQGAEAPARFLNGKELNKSINPDE 293
           P+  +    + NGKE  +SINPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  124 bits (298), Expect = 1e-30
 Identities = 56/84 (66%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
           AKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+
Sbjct: 98  AKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKS 157

Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
            +H+IVLVGGSTRIPKVQ+L+ ++
Sbjct: 158 AVHEIVLVGGSTRIPKVQQLITEY 181



 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 222 PQGAEAPARFLNGKELNKSINPDE 293
           P+  +    + NGKE  +SINPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 97.1 bits (231), Expect = 1e-22
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = +1

Query: 1   AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
           AKR LSS  + ++ I++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K 
Sbjct: 97  AKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKD 156

Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
           QI +IVLVGGSTRIPK+Q+L++DF
Sbjct: 157 QIDEIVLVGGSTRIPKIQQLIKDF 180



 Score = 29.5 bits (63), Expect = 0.031
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 249 FLNGKELNKSINPDE 293
           F +GKELN+ INPDE
Sbjct: 180 FFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 187 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 86
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 566 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 682
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 202 PVQYRGFEPYPSWHHGETSPLAP 134
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,825
Number of Sequences: 336
Number of extensions: 3482
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)