Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20062
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 153 3e-38
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 8e-38
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 135 7e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 120 2e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 108 1e-24
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 69 6e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 63 4e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 2e-09
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.41
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.2
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.9
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 3.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.1
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.1
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 25 8.9
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.9
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 153 bits (370), Expect = 3e-38
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +2
Query: 509 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKEN 688
IQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K
Sbjct: 438 IQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQ 497
Query: 689 KITITNDKGRLSKEEIERMVNEAE 760
KITITNDKGRLSKEEI+RMV+EAE
Sbjct: 498 KITITNDKGRLSKEEIDRMVSEAE 521
Score = 143 bits (346), Expect = 3e-35
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+
Sbjct: 268 AKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKS 327
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
+++IVLVGGSTRIP++QKL+ DF
Sbjct: 328 SVNEIVLVGGSTRIPRIQKLVSDF 351
Score = 76.6 bits (180), Expect = 4e-15
Identities = 43/87 (49%), Positives = 45/87 (51%)
Frame = +3
Query: 249 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 428
F NGKE KSINPDE IL GD SE+ QD GIETAGGVMT
Sbjct: 351 FFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTP 410
Query: 429 LIKRNXXXXXXXXXXXXXYSDNQPGVL 509
LIKRN Y+DNQPGVL
Sbjct: 411 LIKRNTTIPTKKSEVFSTYADNQPGVL 437
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (367), Expect = 8e-38
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +2
Query: 509 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKEN 688
IQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K
Sbjct: 438 IQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQ 497
Query: 689 KITITNDKGRLSKEEIERMVNEAE 760
KITITNDKGRLSKEEI+RMV EAE
Sbjct: 498 KITITNDKGRLSKEEIDRMVAEAE 521
Score = 144 bits (349), Expect = 1e-35
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA
Sbjct: 268 AKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKA 327
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
+++IVLVGGSTRIP+VQKL+ DF
Sbjct: 328 SVNEIVLVGGSTRIPRVQKLVSDF 351
Score = 78.2 bits (184), Expect = 1e-15
Identities = 44/96 (45%), Positives = 49/96 (51%)
Frame = +3
Query: 222 PQGAEAPARFLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 401
P+ + + F NGKE KSINPDE +L GD SE+ QD GI
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401
Query: 402 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVL 509
ETAGGVMT LIKRN YSDNQPGVL
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVL 437
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 135 bits (326), Expect = 7e-33
Identities = 63/85 (74%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKE 685
IQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K
Sbjct: 467 IQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKP 526
Query: 686 NKITITNDKGRLSKEEIERMVNEAE 760
K+ I NDKGRLS+E+IERMV EAE
Sbjct: 527 EKLVIKNDKGRLSEEDIERMVKEAE 551
Score = 111 bits (266), Expect = 1e-25
Identities = 51/93 (54%), Positives = 72/93 (77%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K+
Sbjct: 300 AKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKS 359
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDFLMERSSTNL 279
+I DIVLVGGSTRIPKVQ+LL+ F +++S +
Sbjct: 360 EIDDIVLVGGSTRIPKVQELLESFFGKKASKGI 392
Score = 41.9 bits (94), Expect = 1e-04
Identities = 28/84 (33%), Positives = 35/84 (41%)
Frame = +3
Query: 258 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 437
GK+ +K INPDE +L G++ + + GIET GGVMT LI
Sbjct: 385 GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIG 442
Query: 438 RNXXXXXXXXXXXXXYSDNQPGVL 509
RN DNQ VL
Sbjct: 443 RNTPIPTRKSQIFSTAVDNQNTVL 466
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 120 bits (290), Expect = 2e-28
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA
Sbjct: 272 AKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKA 331
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDFLMERS 267
+HDIVLVGGSTRIPKVQ+L+ DF R+
Sbjct: 332 DVHDIVLVGGSTRIPKVQRLVSDFFDGRA 360
Score = 96.3 bits (229), Expect = 4e-21
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +2
Query: 497 TRSTIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 676
T T V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Query: 677 NKENKITITNDKGRLSKEEIERMVNEAE 760
+ I ITN G LS +I+ M+ A+
Sbjct: 499 GRSAHIEITNSVGHLSSTKIQEMIENAD 526
Score = 35.5 bits (78), Expect = 0.008
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 FLNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMT 425
F +G+ LNKSINPDE +L + S++ QD G+ G V
Sbjct: 355 FFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFG 414
Query: 426 TLIKRNXXXXXXXXXXXXXYSDNQPGV 506
+ RN +DNQ V
Sbjct: 415 VVCPRNTPIPTIKKRTFTTVADNQTTV 441
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 108 bits (259), Expect = 1e-24
Identities = 50/88 (56%), Positives = 68/88 (77%)
Frame = +2
Query: 497 TRSTIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 676
T I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+T
Sbjct: 477 TAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Query: 677 NKENKITITNDKGRLSKEEIERMVNEAE 760
NK++ IT+ G L+ EIE MV +AE
Sbjct: 537 NKDSSITVAGSSG-LTDSEIEAMVADAE 563
Score = 54.8 bits (126), Expect = 1e-08
Identities = 22/50 (44%), Positives = 40/50 (80%)
Frame = +1
Query: 82 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 231
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRV 392
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +3
Query: 261 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 440
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 441 N 443
N
Sbjct: 458 N 458
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 69.3 bits (162), Expect = 6e-13
Identities = 32/84 (38%), Positives = 55/84 (65%)
Frame = +1
Query: 4 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 183
K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++
Sbjct: 305 KHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSE 364
Query: 184 IHDIVLVGGSTRIPKVQKLLQDFL 255
I+ I+L GG++RIP +Q L D++
Sbjct: 365 INSIILFGGASRIPFIQSTLADYV 388
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 63.3 bits (147), Expect = 4e-11
Identities = 29/88 (32%), Positives = 52/88 (59%)
Frame = +1
Query: 4 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 183
KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+
Sbjct: 295 KRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFD 354
Query: 184 IHDIVLVGGSTRIPKVQKLLQDFLMERS 267
I +++L GG++ PK+ L++ E++
Sbjct: 355 ISEVILAGGASNTPKLTSLMESIFPEQT 382
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 57.6 bits (133), Expect = 2e-09
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +1
Query: 4 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 183
K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K
Sbjct: 277 KKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKED 336
Query: 184 IHDIVLVGGSTRIPKVQKLLQDF 252
++ I +VGG TR+P V++++ ++
Sbjct: 337 LYSIEMVGGCTRVPIVKEVIANY 359
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.41
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 632 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 754
D LNVS + S +E +T ++ R+ +EE +RM ++
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASK 98
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 640 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 744
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 657 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 520
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 677 NKENKITITNDKGRLSKEEIERMVNEAE 760
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 190 RGFEPYPSWHHGETSPLAP 134
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 49 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 228
SL G+D+YT I E +A +S+ E +K D + D++ D + VG +
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVGSIAAGGR 387
Query: 229 VQKLLQDFLMERSS 270
L+ F ++++
Sbjct: 388 YDNLVGMFAAKKNA 401
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 329 DSSLDSCTISYGLVRVNRFVELLSIKKSCRSFCTLGIRVEPPTSTI 192
DS + C S+ + + L + ++ CTL I + PTST+
Sbjct: 472 DSDVMDCCFSFLASILTHSIALPRLLRTKIDLCTLQISLSNPTSTV 517
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 302 SYGLVRVNRFV-ELLSIKKSCRSFCTLGIRVEPPTSTIS 189
SY L N+++ ++S SC + LG + E +TIS
Sbjct: 242 SYALNESNQYITSIVSPDSSCENIRILGFKAETNAATIS 280
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 116 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 205
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,967,804
Number of Sequences: 5004
Number of extensions: 58441
Number of successful extensions: 216
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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