Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20062
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 160 1e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 149 2e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 72 4e-13
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 65 7e-11
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 2.4
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 3.1
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 29 4.1
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_53478| Best HMM Match : GASA (HMM E-Value=0.44) 28 7.2
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 7.2
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 9.5
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 9.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 160 bits (388), Expect = 1e-39
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +2
Query: 509 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKEN 688
IQVFEGER+MT NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA++KST KEN
Sbjct: 442 IQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKEN 501
Query: 689 KITITNDKGRLSKEEIERMVNEA 757
KITITNDKGRLSKE+IERMVNEA
Sbjct: 502 KITITNDKGRLSKEDIERMVNEA 524
Score = 138 bits (334), Expect = 5e-33
Identities = 68/85 (80%), Positives = 77/85 (90%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--D 174
AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+
Sbjct: 270 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGG 329
Query: 175 KAQIHDIVLVGGSTRIPKVQKLLQD 249
K IHDIVLVGGSTRIPK+QK+LQ+
Sbjct: 330 KESIHDIVLVGGSTRIPKIQKMLQE 354
Score = 81.4 bits (192), Expect = 7e-16
Identities = 43/84 (51%), Positives = 46/84 (54%)
Frame = +3
Query: 258 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 437
GKELNKSINPDE ILHGDK + V+D GIETAGGVM+ LIK
Sbjct: 358 GKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIK 417
Query: 438 RNXXXXXXXXXXXXXYSDNQPGVL 509
RN YSDNQPGVL
Sbjct: 418 RNSTIPTKQTQTFTTYSDNQPGVL 441
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 158 bits (384), Expect = 4e-39
Identities = 73/88 (82%), Positives = 83/88 (94%)
Frame = +2
Query: 497 TRSTIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 676
T IQV+EGER++TKDNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST
Sbjct: 530 TSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKST 589
Query: 677 NKENKITITNDKGRLSKEEIERMVNEAE 760
KENKITITNDKGRLSKE+IERMV EAE
Sbjct: 590 GKENKITITNDKGRLSKEDIERMVKEAE 617
Score = 133 bits (322), Expect = 1e-31
Identities = 63/85 (74%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-K 177
AKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K
Sbjct: 363 AKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESK 422
Query: 178 AQIHDIVLVGGSTRIPKVQKLLQDF 252
+I +IV+VGGSTRIPK+Q LLQ+F
Sbjct: 423 EKIDEIVMVGGSTRIPKIQSLLQNF 447
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/87 (50%), Positives = 45/87 (51%)
Frame = +3
Query: 249 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 428
F NGKELNKSINPDE ILHGDKSE QD G+ETAGGVMT
Sbjct: 447 FFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTA 506
Query: 429 LIKRNXXXXXXXXXXXXXYSDNQPGVL 509
IKRN YSDNQ VL
Sbjct: 507 AIKRNTTIPTKQTQTFTTYSDNQTSVL 533
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 149 bits (361), Expect = 2e-36
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +2
Query: 506 TIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKE 685
TI+VFEGER +TK NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K
Sbjct: 440 TIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKT 499
Query: 686 NKITITNDKGRLSKEEIERMVNEAE 760
ITITNDKGRLSKEEI+RM+N+AE
Sbjct: 500 GSITITNDKGRLSKEEIDRMINDAE 524
Score = 131 bits (316), Expect = 7e-31
Identities = 59/89 (66%), Positives = 77/89 (86%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+
Sbjct: 271 AKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKS 330
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDFLMERS 267
IH++VLVGGSTR+PK+QK+L+++ +S
Sbjct: 331 DIHEVVLVGGSTRVPKIQKMLEEYFSGKS 359
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/86 (46%), Positives = 45/86 (52%)
Frame = +3
Query: 249 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 428
+ +GK LNKSINPDE IL GDKS+EV+D GIETAG VMT
Sbjct: 354 YFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTK 413
Query: 429 LIKRNXXXXXXXXXXXXXYSDNQPGV 506
LI+RN YSDNQP V
Sbjct: 414 LIERNARIPTKATQTFTTYSDNQPAV 439
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 136 bits (328), Expect = 2e-32
Identities = 64/85 (75%), Positives = 73/85 (85%)
Frame = +2
Query: 506 TIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKE 685
TIQVFEGER MTKDN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K T +
Sbjct: 1134 TIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNK 1193
Query: 686 NKITITNDKGRLSKEEIERMVNEAE 760
KITITND+ RL+ E+IERMVN+AE
Sbjct: 1194 EKITITNDQNRLTPEDIERMVNDAE 1218
Score = 117 bits (281), Expect = 1e-26
Identities = 55/84 (65%), Positives = 70/84 (83%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K+
Sbjct: 967 AKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKS 1026
Query: 181 QIHDIVLVGGSTRIPKVQKLLQDF 252
+IH+IVLVGGSTRIPKVQ+L++DF
Sbjct: 1027 EIHEIVLVGGSTRIPKVQQLVKDF 1050
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/83 (33%), Positives = 35/83 (42%)
Frame = +3
Query: 249 FLNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 428
F GKE ++ INPDE +L G+ E+ + GIET GGVMT
Sbjct: 1050 FFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTK 1107
Query: 429 LIKRNXXXXXXXXXXXXXYSDNQ 497
LI RN +DNQ
Sbjct: 1108 LISRNTVIPTKKSQVFSTAADNQ 1130
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 116 bits (279), Expect = 2e-26
Identities = 56/88 (63%), Positives = 68/88 (77%)
Frame = +2
Query: 497 TRSTIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 676
T+ I+VF+GER M DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T
Sbjct: 242 TQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGT 301
Query: 677 NKENKITITNDKGRLSKEEIERMVNEAE 760
+E +I I G LSK+ IE M+ EAE
Sbjct: 302 GREQQIVI-QSSGGLSKDAIENMIKEAE 328
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 AKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 168
AK LSSS Q I + + ++R++FE L ADL T+ P +K L+DA+
Sbjct: 77 AKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDAE 136
Query: 169 MDKAQIHDIVLVGGSTRIPKVQKLLQD 249
++K +I D++LVGG TR+PKVQ+ +QD
Sbjct: 137 INKGEIGDVLLVGGMTRMPKVQQTVQD 163
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +3
Query: 258 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 437
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 166 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 221
Query: 438 RN 443
RN
Sbjct: 222 RN 223
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/89 (37%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 AKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 165
AK L+ + + +I++ SL EG + F +I+R FE +N DLF+ ++P+ + L +
Sbjct: 298 AKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEV 357
Query: 166 KMDKAQIHDIVLVGGSTRIPKVQKLLQDF 252
++ K ++ ++VLVGGSTR+PK+++L+Q+F
Sbjct: 358 ELPKEEVDEVVLVGGSTRVPKIRQLIQEF 386
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 4 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 183
K+ LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M
Sbjct: 255 KQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMND 314
Query: 184 IHDIVLVGGSTRIPKVQKLL 243
I +VLVGG R+PKVQ L
Sbjct: 315 IDSVVLVGGGIRVPKVQDAL 334
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 64.9 bits (151), Expect = 7e-11
Identities = 28/56 (50%), Positives = 44/56 (78%)
Frame = +1
Query: 82 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQD 249
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQD 108
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +3
Query: 258 GKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 437
G+ +K++NPDE +L GD V+D GIET GGV T LI
Sbjct: 111 GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLIT 166
Query: 438 RN 443
RN
Sbjct: 167 RN 168
Score = 34.7 bits (76), Expect = 0.083
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 497 TRSTIQVFEGERAMTKDNNLLGKFEL 574
T+ I+VF+GER M DN LLG+F+L
Sbjct: 187 TQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +2
Query: 515 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKI 694
+FE ++ + + + G EL PPA V ++E +F+ +G+++ + S+ +E K
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLMSSGNSDMSSLEELKE 184
Query: 695 TITNDKGRLSKEEIERMVNE 754
+T ++ + + +VN+
Sbjct: 185 CVTKKPSTVTDKHVTYIVNK 204
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 35.1 bits (77), Expect = 0.063
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 4 KRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 180
K+ +S++T + I I+ E D + + RA+FEEL ADL + P+ +L A+ K
Sbjct: 331 KKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKY 388
Query: 181 QIHDIV 198
+ ++V
Sbjct: 389 SVKNVV 394
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 33.1 bits (72), Expect = 0.25
Identities = 11/30 (36%), Positives = 24/30 (80%)
Frame = +1
Query: 169 MDKAQIHDIVLVGGSTRIPKVQKLLQDFLM 258
+ ++ + ++LVGG+TR PK+Q+LL+++ +
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFV 64
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 619 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 726
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -1
Query: 452 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 318
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 594 GAGGIPVSSNLPSKLLSLVIARSPSNTWI 508
G GG PV+S SKL++ VIA SN++I
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 398 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIK 252
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAK 57
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 4 KRTLSSSTQASIEIDSLFEGIDFYTSITR 90
K LS+ A+ +DSL EGIDF ++R
Sbjct: 237 KNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +1
Query: 76 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFL 255
T ++ARF++ DL T++P+ ++++ D + +++ G K + L ++ L
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAE----KARLLAEETL 231
Query: 256 MERSSTNLL 282
++ N L
Sbjct: 232 VQPCQRNTL 240
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 631 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 735
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 637 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 738
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_53478| Best HMM Match : GASA (HMM E-Value=0.44)
Length = 136
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 461 FSGDGSVTLDECGHDTSSSLNTEGKGCYI----KQQQILHLLRLVTVQDSSLDSCTISYG 294
F DG V DE G DT + K + K ++ ++ L+ +Q ++ C YG
Sbjct: 13 FDNDGDV--DENGDDTEDDDDDYKKILMVTMMMKMLLMMMIMMLMIIQITNPKKCRARYG 70
Query: 293 LVRVNRFVELLSIKKSCRSF 234
L R + + + KK C F
Sbjct: 71 LDRQHEWCKPCRRKKKCVRF 90
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 162
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 445 LPSPLNRLRHSPPTLITNP 501
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 598 WRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 726
WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 246 WRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,007,579
Number of Sequences: 59808
Number of extensions: 484181
Number of successful extensions: 3873
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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