Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20057X
         (999 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    50   7e-05
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    48   3e-04
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    48   4e-04
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    44   0.005
UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep...    40   0.076
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon...    34   5.0  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 50.4 bits (115), Expect = 7e-05
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1

Query: 4  SSTAVAAALELVDPPGCRNSARG 72
          SSTAVAAALELVDPPGCRNSARG
Sbjct: 3  SSTAVAAALELVDPPGCRNSARG 25


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 48.4 bits (110), Expect = 3e-04
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +1

Query: 4  SSTAVAAALELVDPPGCRNSARGXPI 81
          SS AVAAALELVDPPGCRNSARG  I
Sbjct: 3  SSPAVAAALELVDPPGCRNSARGPGI 28


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 48.0 bits (109), Expect = 4e-04
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +1

Query: 4  SSTAVAAALELVDPPGCRNSAR 69
          SSTAVAAALELVDPPGCRNSAR
Sbjct: 2  SSTAVAAALELVDPPGCRNSAR 23


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 44.4 bits (100), Expect = 0.005
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 4  SSTAVAAALELVDPPGCRNS 63
          SSTAVAAALELVDPPGCRNS
Sbjct: 9  SSTAVAAALELVDPPGCRNS 28


>UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep:
           Calumenin homologue - Ciona intestinalis (Transparent
           sea squirt)
          Length = 308

 Score = 40.3 bits (90), Expect = 0.076
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 4   SSTAVAAALELVDPPGCR 57
           SSTAVAAALELVDPPGCR
Sbjct: 122 SSTAVAAALELVDPPGCR 139


>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
          japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
          (Planarian)
          Length = 263

 Score = 34.3 bits (75), Expect = 5.0
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +1

Query: 31 ELVDPPGCRNSARG 72
          +LVDPPGCRNSARG
Sbjct: 5  QLVDPPGCRNSARG 18


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,416,436
Number of Sequences: 1657284
Number of extensions: 8246555
Number of successful extensions: 9861
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9860
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)