Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20057X
         (999 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    48   2e-05
BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p pro...    30   4.3  
AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p pro...    30   4.3  
AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-P...    30   4.3  
AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-P...    30   4.3  
AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-P...    30   4.3  
AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-P...    30   4.3  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +1

Query: 4  SSTAVAAALELVDPPGCRNSAR 69
          SSTAVAAALELVDPPGCRNSAR
Sbjct: 2  SSTAVAAALELVDPPGCRNSAR 23


>BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 83  VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 129


>AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p
           protein.
          Length = 637

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 102 VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 148


>AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-PD,
           isoform D protein.
          Length = 592

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 57  VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 103


>AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-PC,
           isoform C protein.
          Length = 637

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 102 VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 148


>AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-PB,
           isoform B protein.
          Length = 637

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 102 VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 148


>AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-PA,
           isoform A protein.
          Length = 637

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 79  IXRHXHAXSLLNHY-NRSDFY*PLLDXVPSWLSICSPTCPGETEKXF 216
           + R  H   LL H  +  DFY  +     SW+ + S  CP +T K +
Sbjct: 102 VQRVTHVPKLLQHLLDAPDFYIEMKWEFTSWVPLMSRLCPSDTYKVY 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,682,817
Number of Sequences: 53049
Number of extensions: 400433
Number of successful extensions: 713
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5058363141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)