Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20056
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.0  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.2  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 FDHSNADVAADSIIISDVTWTS 284
           +D+SN   A +SII +  TW S
Sbjct: 32  YDYSNRTQALESIIANIPTWLS 53


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 224 PQQCGCGSRLYHNFRRD 274
           PQ CG G   Y    RD
Sbjct: 398 PQGCGAGKENYQTMSRD 414


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 268 SEIMIESAATSALLWSKTRSGCSWVYRSQI 179
           S +++ S   S  L+   R+G SW+ R QI
Sbjct: 673 SAVLLISDRLSRDLYCGIRAGLSWLERIQI 702


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 268 SEIMIESAATSALLWSKTRSGCSWVYRSQI 179
           S +++ S   S  L+   R+G SW+ R QI
Sbjct: 711 SAVLLISDRLSRDLYCGIRAGLSWLERIQI 740


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 224 PQQCGCGSRLYHNFRRD 274
           PQ CG G   Y    RD
Sbjct: 398 PQGCGAGKENYQTMSRD 414


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 149 SFDLERRCGYSEFETF 102
           SF L+R  GY  F+T+
Sbjct: 234 SFKLQRNIGYFVFQTY 249


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 410 VKYQVVPSSTXVRLRSL 360
           VKYQVVPS+  +   SL
Sbjct: 396 VKYQVVPSALQMWSTSL 412


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 410 VKYQVVPSSTXVRLRSL 360
           VKYQVVPS+  +   SL
Sbjct: 396 VKYQVVPSALQMWSTSL 412


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 410 VKYQVVPSSTXVRLRSL 360
           VKYQVVPS+  +   SL
Sbjct: 22  VKYQVVPSALQMWSTSL 38


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 161 VWQRREYLGPIHP 199
           +WQ++E+ GP  P
Sbjct: 952 IWQQQEFTGPPLP 964


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 161 VWQRREYLGPIHP 199
           +WQ++E+ GP  P
Sbjct: 948 IWQQQEFTGPPLP 960


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,458
Number of Sequences: 438
Number of extensions: 3811
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)