Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20053
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Re...    42   0.010
UniRef50_Q70BZ3 Cluster: Mod(Mdg4)-54.5; n=2; Drosophila melanog...    37   0.49 
UniRef50_Q4XSI5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q8D272 Cluster: Wg004 protein; n=1; Wigglesworthia glos...    34   2.6  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   4.6  
UniRef50_UPI0000DB703E Cluster: PREDICTED: similar to CG2698-PA;...    33   6.0  
UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n...    33   6.0  
UniRef50_UPI00006A07FB Cluster: UPI00006A07FB related cluster; n...    33   6.0  
UniRef50_O17199 Cluster: Putative uncharacterized protein; n=4; ...    33   6.0  
UniRef50_UPI000038E3D4 Cluster: hypothetical protein Faci_030012...    33   8.0  

>UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep:
           Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
          Length = 344

 Score = 42.3 bits (95), Expect = 0.010
 Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = +2

Query: 5   NRSHGSKATWFCYKNRY-HCRASVITYDDVIIQVRNEHNH 121
           ++ +G K +W C K R   CR+S++T++D+I+++   HNH
Sbjct: 304 HQKYGEKTSWRCAKWRNGFCRSSIVTFEDIIVKLGKPHNH 343


>UniRef50_Q70BZ3 Cluster: Mod(Mdg4)-54.5; n=2; Drosophila
           melanogaster|Rep: Mod(Mdg4)-54.5 - Drosophila
           melanogaster (Fruit fly)
          Length = 114

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +2

Query: 5   NRSHGSKATWFCYKNRY-HCRASVITYD---DVIIQVRNEHNH 121
           N S GSK  W C +NRY  C A +IT     ++II+   +HNH
Sbjct: 47  NNSRGSKTYWLCARNRYMRCAARIITCSVTGELIIK-NQQHNH 88


>UniRef50_Q4XSI5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 73

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 19/57 (33%), Positives = 34/57 (59%)
 Frame = +1

Query: 418 HIYSFVICKFVFQYL*LAFFSVYILYIYRYICVELVLTEKLLIDYLHMIVSFDYDCV 588
           +++++++ KFV++ +   FFS  +L+I   I   LV  EK+   Y+H   S+ Y CV
Sbjct: 14  YVHTYLLPKFVYKNI--LFFSYILLFIVYCIFYVLVKIEKIK-SYIHKAYSYKYMCV 67


>UniRef50_Q8D272 Cluster: Wg004 protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           Wg004 protein - Wigglesworthia glossinidia brevipalpis
          Length = 239

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 401 LNITLAIFIALSFVNLFFNTSNWHFFRFIFCTYI 502
           ++ +  I++ + F+NL FNT    FF F +CTYI
Sbjct: 1   MSFSCKIYLKIFFINLIFNTC-LLFFHFFYCTYI 33


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
 Frame = +1

Query: 370 YTVMCILFL*FEYYFGHIYSFV-----ICKFVFQYL*LAFFSVYILYIYRYICVELVLTE 534
           Y  +CI    + Y + +IY ++     IC +++ Y+ +  +    +YIY YI    + T 
Sbjct: 50  YIYICIYIYPYIYIYIYIYPYIYPYIYICIYIYPYIYIYIYIYPYIYIYIYI-YTYIYTH 108

Query: 535 KLLIDYLHM-IVSFDY 579
             +  YL++ I SF Y
Sbjct: 109 IYICTYLYIYIYSFIY 124


>UniRef50_UPI0000DB703E Cluster: PREDICTED: similar to CG2698-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG2698-PA
           - Apis mellifera
          Length = 761

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = +1

Query: 358 VTT*YTVMCILFL*FEYYFGHIYSFVICKFVFQYL*LAFFSVYILYIYRYICVELVLTEK 537
           +TT  T M I F+   Y    I S  I   +  Y  + F ++ ILY+  +I   +++ E 
Sbjct: 165 ITTCNTFM-ITFILIGYVMWFIISLYISNILGAYQIIVFVTLQILYLIGFIYEVILIMEN 223

Query: 538 LLIDYLHM--IVSFDYDCVNNLTKD 606
             ++  HM  + +  +   NNLT D
Sbjct: 224 QELEDKHMTFMEAISFALTNNLTTD 248


>UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n=2;
            Danio rerio|Rep: UPI00015A52A9 UniRef100 entry - Danio
            rerio
          Length = 2279

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = +1

Query: 382  CILFL*FEYYFGHIYSFVIC-KFVFQYL*LAFFSVYILY-IYRYI-CVELVLTEKLLIDY 552
            C LF+ +  +  +IY+++IC  ++F YL L   S++I++ I+ +I CV L +     I  
Sbjct: 887  CYLFIIYYIFSCYIYNYLICLLYLFIYL-LCLLSIFIMFIIFMFIYCVNLFIYLLCCIYL 945

Query: 553  LHMIVSFDY 579
              + + F Y
Sbjct: 946  SCLFIIFTY 954


>UniRef50_UPI00006A07FB Cluster: UPI00006A07FB related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A07FB UniRef100 entry -
           Xenopus tropicalis
          Length = 177

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/50 (28%), Positives = 31/50 (62%)
 Frame = +1

Query: 379 MCILFL*FEYYFGHIYSFVICKFVFQYL*LAFFSVYILYIYRYICVELVL 528
           +C+    + Y + +IY +++C +++ Y+   +  +YI YIY YI + ++L
Sbjct: 90  VCLSLQCWXYIYIYIYIYIMCVYIYIYI---YIYIYI-YIYIYIYIYIIL 135


>UniRef50_O17199 Cluster: Putative uncharacterized protein; n=4;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 431

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = -2

Query: 492 QNINRKKCQLEVLKNKFTNDKAINMAKVIFKSQKK-----DAHYGILCRYY*IFPLRH 334
           QN+  KK Q     N+ T  K I+ A++ FKS K      +AHY  L     + P+ H
Sbjct: 194 QNVQLKKFQFSNGSNQDTQKKFIDRAEIAFKSAKSSTRTVEAHYNSLAEIAQLLPIFH 251


>UniRef50_UPI000038E3D4 Cluster: hypothetical protein Faci_03001259;
            n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
            protein Faci_03001259 - Ferroplasma acidarmanus fer1
          Length = 1102

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 25/88 (28%), Positives = 39/88 (44%)
 Frame = -1

Query: 625  YLVYFMDPLLNYLHSHNQNLQSCEDNQSIVFQLKLIPRIYIYICTKYKPKKMPIRGIEKQ 446
            Y   ++ P   Y+++ +    S   NQS    + L P   I+I     PK    + ++  
Sbjct: 839  YHFLYVTPDTTYINATDTGYTS--QNQS----MNLTPGQNIHISLVLSPKNSSFKAVQGT 892

Query: 445  IYK*QSYKYGQSNIQITKKGCTLRYIMS 362
            +   Q Y YG SN+ IT  G T+ Y  S
Sbjct: 893  VENVQ-YGYGLSNVNITSDGKTIGYTNS 919


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,811,862
Number of Sequences: 1657284
Number of extensions: 9657301
Number of successful extensions: 24804
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24717
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)