Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20053
(658 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 29 0.044
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 27 0.18
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 25 0.72
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 25 0.72
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 25 0.72
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 1.7
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 1.7
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 1.7
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 23 2.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.9
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 5.1
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 5.1
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 8.9
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 8.9
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 8.9
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 28.7 bits (61), Expect = 0.044
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 370 YTVMCILFL*FEYYFGHIYSFVICKFVFQYL*LAFFSVYILYI 498
+ + + FL YYF + + ++C + F Y F+V++L++
Sbjct: 89 FIIFTVHFLLCTYYFYYAFIILLCVYYFYYA-FIIFTVHLLFL 130
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 508 ICVELVLTEKLLIDYLHMIVSFDYDCVNNLTK 603
+ + V+ I+++ ++ FD CV+N TK
Sbjct: 454 VWINSVINRWKFIEFIRKVLEFDVKCVSNYTK 485
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 24.6 bits (51), Expect = 0.72
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 409 YFGHIYSFVICKFVFQYL*LAFFSVYILYIY--RYICVELVLTEKLLIDYLHMIVSFDYD 582
+F ++ +++ Y+ + V L Y CV V+ L L + + YD
Sbjct: 139 FFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYD 198
Query: 583 CVNNL 597
VNNL
Sbjct: 199 DVNNL 203
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 24.6 bits (51), Expect = 0.72
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 409 YFGHIYSFVICKFVFQYL*LAFFSVYILYIY--RYICVELVLTEKLLIDYLHMIVSFDYD 582
+F ++ +++ Y+ + V L Y CV V+ L L + + YD
Sbjct: 139 FFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYD 198
Query: 583 CVNNL 597
VNNL
Sbjct: 199 DVNNL 203
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 24.6 bits (51), Expect = 0.72
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 370 YTVMCILFL*FEYYFGHIYSFVICKFVFQYL*LAFFSVY---ILYIYRYICVELVLTEKL 540
+ V I+F+ F Y +++ ++ ++ + FF Y I+Y Y +E++L +
Sbjct: 114 FVVTNIIFVLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYFLIYAVLEMLLQKYK 173
Query: 541 LIDYL 555
+ Y+
Sbjct: 174 TVTYV 178
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 130 ALCYINFTVAR*NRF*NV*PCALKLHPLNCNCSFAW 237
ALC IN N N C ++ CNC W
Sbjct: 101 ALCNINTDDCSPNPCRNNGSCVDRIADFECNCKNGW 136
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 253 FNHPRPMQNYSYN 215
+N+P P Q Y YN
Sbjct: 350 YNYPNPQQQYYYN 362
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 253 FNHPRPMQNYSYN 215
+N+P P Q Y YN
Sbjct: 298 YNYPNPQQQYYYN 310
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 457 YL*LAFFSVYILYIYRYICVELVLTEKLLIDYL 555
Y AFF V++ Y I V TEK + D+L
Sbjct: 115 YYYYAFFGVHLAYGVVIIYSICVQTEKSVFDFL 147
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 97 NNNVIISNYRRSTVISV 47
NNNV+ N+R S S+
Sbjct: 1498 NNNVVARNHRNSVASSI 1514
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 400 FEYYFGHIYSFVICKFVFQYL*LAF 474
F YF +I+ CK + Q AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 97 NNNVIISNYRRSTVISV 47
NNNV+ N+R S S+
Sbjct: 1498 NNNVVARNHRNSVASSI 1514
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 400 FEYYFGHIYSFVICKFVFQYL*LAF 474
F YF +I+ CK + Q AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 97 NNNVIISNYRRSTVISV 47
NNNV+ N+R S S+
Sbjct: 1498 NNNVVARNHRNSVASSI 1514
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 400 FEYYFGHIYSFVICKFVFQYL*LAF 474
F YF +I+ CK + Q AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 97 NNNVIISNYRRSTVISV 47
NNNV+ N+R S S+
Sbjct: 1498 NNNVVARNHRNSVASSI 1514
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 400 FEYYFGHIYSFVICKFVFQYL*LAF 474
F YF +I+ CK + Q AF
Sbjct: 386 FASYFAYIFGKFACKIMIQGFSYAF 410
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +1
Query: 400 FEYYFGHIYSFVIC 441
F+YY G +++ +C
Sbjct: 144 FQYYIGRSFTYYVC 157
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +2
Query: 389 FFCDLNITLAIFIALSFVNLFF----NTSNWHFFRFI 487
F CD L ++ FVN+FF SN+ F R I
Sbjct: 85 FECDNEPKLRHYLIFIFVNVFFWVIILMSNYAFTRII 121
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 401 LNITLAIFIALSFVNLFFNTSN 466
LN+ LA+F++L+ + +N
Sbjct: 153 LNVLLAVFMSLALIEYILMQTN 174
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 401 LNITLAIFIALSFVNLFFNTSN 466
LN+ LA+F++L+ + +N
Sbjct: 153 LNVLLAVFMSLALIEYILMQTN 174
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 401 LNITLAIFIALSFVNLFFNTSN 466
LN+ LA+F++L+ + +N
Sbjct: 153 LNVLLAVFMSLALIEYILMQTN 174
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,341
Number of Sequences: 336
Number of extensions: 2945
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -