Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20045X
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   1.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   2.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   6.0  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    20   8.0  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    20   8.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   8.0  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 13  APNKMKLLVVFAMCMLAASA 72
           APN  +  VV+A C L A+A
Sbjct: 123 APNGHQTQVVYASCKLQAAA 142


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect(2) = 2.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 291 CRCRPTACSSTPCV 250
           C+ R   C S+PC+
Sbjct: 58  CQNRINLCDSSPCL 71



 Score = 19.4 bits (38), Expect(2) = 2.7
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -1

Query: 303 NNFLCRCRP 277
           N+++C C+P
Sbjct: 43  NSYICTCKP 51


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 163 VRQSLEYESQGKGSIIENVVNNLIIDKRRNT 255
           V   L+   +G    I  V+++ ++D R+NT
Sbjct: 144 VHDILQPGVKGLHGPITRVIDSKVVDSRKNT 174


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 89  PRTLLTKTSRRNCTTASSPATTTV 160
           PR++ T T     +T++SP T  +
Sbjct: 215 PRSVATPTGIPTPSTSASPPTVNI 238


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +1

Query: 25  MKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDY 153
           MK++++  +   A +A          N D++  L+N  L  +Y
Sbjct: 1   MKIIILAVLIATAVAATYDVYPTKYDNVDIDAILHNKRLFDNY 43


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +1

Query: 25  MKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDY 153
           MK++++  +   A +A          N D++  L+N  L  +Y
Sbjct: 1   MKIIILAVLIATAVAATYDVYPTKYDNVDIDAILHNKRLFDNY 43


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 13  APNKMKLLVVFAMCMLAASA 72
           APN  +  VV+  C L A+A
Sbjct: 125 APNGHQTQVVYDSCKLQAAA 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,154
Number of Sequences: 336
Number of extensions: 1484
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)